Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGN1P05114 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HMGN1P05114 AC007663.1-201ENST00000438948 1240 ntBASIC16.17■□□□□ 0.18
HMGN1P05114 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.17■□□□□ 0.18
HMGN1P05114 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.17■□□□□ 0.18
HMGN1P05114 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.17■□□□□ 0.18
HMGN1P05114 AP003071.4-201ENST00000562276 1284 ntBASIC16.17■□□□□ 0.18
HMGN1P05114 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HMGN1P05114 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 AC010653.2-201ENST00000623505 997 ntBASIC16.17■□□□□ 0.18
HMGN1P05114 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGN1P05114 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
HMGN1P05114 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGN1P05114 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HMGN1P05114 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HMGN1P05114 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HMGN1P05114 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGN1P05114 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGN1P05114 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HMGN1P05114 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HMGN1P05114 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGN1P05114 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGN1P05114 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.16■□□□□ 0.18
HMGN1P05114 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGN1P05114 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGN1P05114 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGN1P05114 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN1P05114 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGN1P05114 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGN1P05114 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HMGN1P05114 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
HMGN1P05114 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGN1P05114 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGN1P05114 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGN1P05114 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.15■□□□□ 0.18
HMGN1P05114 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HMGN1P05114 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HMGN1P05114 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGN1P05114 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HMGN1P05114 RBM17P1-201ENST00000453646 1190 ntBASIC16.15■□□□□ 0.18
HMGN1P05114 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HMGN1P05114 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGN1P05114 C2orf69P3-201ENST00000565542 1120 ntBASIC16.15■□□□□ 0.18
HMGN1P05114 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HMGN1P05114 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HMGN1P05114 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms