Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBB4AP04350 PCDHB17P-201ENST00000539533 2393 ntBASIC19.11■□□□□ 0.65
TUBB4AP04350 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.11■□□□□ 0.65
TUBB4AP04350 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.1■□□□□ 0.65
TUBB4AP04350 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.1■□□□□ 0.65
TUBB4AP04350 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.1■□□□□ 0.65
TUBB4AP04350 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.1■□□□□ 0.65
TUBB4AP04350 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
TUBB4AP04350 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
TUBB4AP04350 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
TUBB4AP04350 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.1■□□□□ 0.65
TUBB4AP04350 DDX43P3-201ENST00000441064 443 ntBASIC19.1■□□□□ 0.65
TUBB4AP04350 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.1■□□□□ 0.65
TUBB4AP04350 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.1■□□□□ 0.65
TUBB4AP04350 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.1■□□□□ 0.65
TUBB4AP04350 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.1■□□□□ 0.65
TUBB4AP04350 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.1■□□□□ 0.65
TUBB4AP04350 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 AC006449.5-201ENST00000610658 2098 ntBASIC19.1■□□□□ 0.65
TUBB4AP04350 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.1■□□□□ 0.65
TUBB4AP04350 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.1■□□□□ 0.65
TUBB4AP04350 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB4AP04350 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.1■□□□□ 0.65
TUBB4AP04350 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TUBB4AP04350 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TUBB4AP04350 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.09■□□□□ 0.65
TUBB4AP04350 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.09■□□□□ 0.65
TUBB4AP04350 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.09■□□□□ 0.65
TUBB4AP04350 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TUBB4AP04350 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.09■□□□□ 0.65
TUBB4AP04350 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TUBB4AP04350 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.09■□□□□ 0.65
TUBB4AP04350 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 AL513523.2-202ENST00000427283 2040 ntBASIC19.09■□□□□ 0.65
TUBB4AP04350 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TUBB4AP04350 NIFKP9-201ENST00000419265 221 ntBASIC19.09■□□□□ 0.65
TUBB4AP04350 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.09■□□□□ 0.65
TUBB4AP04350 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.09■□□□□ 0.65
TUBB4AP04350 MIR3180-4-201ENST00000582223 153 ntBASIC19.09■□□□□ 0.65
TUBB4AP04350 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.09■□□□□ 0.65
TUBB4AP04350 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TUBB4AP04350 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.09■□□□□ 0.65
TUBB4AP04350 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.09■□□□□ 0.65
TUBB4AP04350 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.09■□□□□ 0.65
TUBB4AP04350 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TUBB4AP04350 AC099343.3-201ENST00000605834 2503 ntBASIC19.09■□□□□ 0.65
TUBB4AP04350 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TUBB4AP04350 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB4AP04350 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
TUBB4AP04350 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TUBB4AP04350 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TUBB4AP04350 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TUBB4AP04350 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TUBB4AP04350 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.08■□□□□ 0.65
TUBB4AP04350 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
TUBB4AP04350 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TUBB4AP04350 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TUBB4AP04350 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.08■□□□□ 0.65
TUBB4AP04350 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
TUBB4AP04350 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
TUBB4AP04350 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.08■□□□□ 0.64
TUBB4AP04350 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.08■□□□□ 0.64
TUBB4AP04350 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TUBB4AP04350 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.08■□□□□ 0.64
TUBB4AP04350 RARRES2P10-201ENST00000564312 460 ntBASIC19.08■□□□□ 0.64
TUBB4AP04350 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TUBB4AP04350 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.08■□□□□ 0.64
TUBB4AP04350 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms