Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LMNAP02545 AL512353.2-201ENST00000448759 1962 ntBASIC18.62■□□□□ 0.57
LMNAP02545 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LMNAP02545 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LMNAP02545 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
LMNAP02545 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LMNAP02545 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LMNAP02545 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
LMNAP02545 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LMNAP02545 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LMNAP02545 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LMNAP02545 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LMNAP02545 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LMNAP02545 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LMNAP02545 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.62■□□□□ 0.57
LMNAP02545 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.62■□□□□ 0.57
LMNAP02545 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LMNAP02545 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.62■□□□□ 0.57
LMNAP02545 MIR3197-201ENST00000582241 73 ntBASIC18.62■□□□□ 0.57
LMNAP02545 MIR3180-5-201ENST00000583743 153 ntBASIC18.62■□□□□ 0.57
LMNAP02545 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.62■□□□□ 0.57
LMNAP02545 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
LMNAP02545 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.62■□□□□ 0.57
LMNAP02545 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.62■□□□□ 0.57
LMNAP02545 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.62■□□□□ 0.57
LMNAP02545 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LMNAP02545 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LMNAP02545 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LMNAP02545 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LMNAP02545 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LMNAP02545 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LMNAP02545 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.62■□□□□ 0.57
LMNAP02545 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
LMNAP02545 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LMNAP02545 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LMNAP02545 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.61■□□□□ 0.57
LMNAP02545 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.61■□□□□ 0.57
LMNAP02545 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LMNAP02545 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.61■□□□□ 0.57
LMNAP02545 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.61■□□□□ 0.57
LMNAP02545 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.61■□□□□ 0.57
LMNAP02545 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LMNAP02545 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMNAP02545 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LMNAP02545 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.6■□□□□ 0.57
LMNAP02545 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LMNAP02545 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.6■□□□□ 0.57
LMNAP02545 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.6■□□□□ 0.57
LMNAP02545 AC009053.2-201ENST00000563701 2365 ntBASIC18.6■□□□□ 0.57
LMNAP02545 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.6■□□□□ 0.57
LMNAP02545 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.6■□□□□ 0.57
LMNAP02545 AL023284.2-201ENST00000405850 579 ntBASIC18.6■□□□□ 0.57
LMNAP02545 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.6■□□□□ 0.57
LMNAP02545 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.6■□□□□ 0.57
LMNAP02545 GUSBP12-201ENST00000513727 720 ntBASIC18.6■□□□□ 0.57
LMNAP02545 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.6■□□□□ 0.57
LMNAP02545 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.6■□□□□ 0.57
LMNAP02545 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.6■□□□□ 0.57
LMNAP02545 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.6■□□□□ 0.57
LMNAP02545 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.6■□□□□ 0.57
LMNAP02545 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
LMNAP02545 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMNAP02545 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
LMNAP02545 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms