Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.8■□□□□ 0.44
PDGFBP01127 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.8■□□□□ 0.44
PDGFBP01127 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PDGFBP01127 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 AC008761.3-201ENST00000624803 892 ntBASIC17.8■□□□□ 0.44
PDGFBP01127 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PDGFBP01127 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PDGFBP01127 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
PDGFBP01127 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
PDGFBP01127 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFBP01127 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFBP01127 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFBP01127 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PDGFBP01127 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PDGFBP01127 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
PDGFBP01127 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.79■□□□□ 0.44
PDGFBP01127 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFBP01127 AL161938.1-201ENST00000569833 2180 ntBASIC17.79■□□□□ 0.44
PDGFBP01127 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.79■□□□□ 0.44
PDGFBP01127 AP002414.1-201ENST00000391405 1147 ntBASIC17.79■□□□□ 0.44
PDGFBP01127 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.79■□□□□ 0.44
PDGFBP01127 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.79■□□□□ 0.44
PDGFBP01127 CXCL1P1-201ENST00000502804 216 ntBASIC17.79■□□□□ 0.44
PDGFBP01127 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PDGFBP01127 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.79■□□□□ 0.44
PDGFBP01127 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.79■□□□□ 0.44
PDGFBP01127 GGTLC5P-201ENST00000617623 998 ntBASIC17.79■□□□□ 0.44
PDGFBP01127 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.79■□□□□ 0.44
PDGFBP01127 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.79■□□□□ 0.44
PDGFBP01127 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.79■□□□□ 0.44
PDGFBP01127 AC007952.6-201ENST00000573168 2673 ntBASIC17.79■□□□□ 0.44
PDGFBP01127 AC003957.1-201ENST00000625108 2673 ntBASIC17.79■□□□□ 0.44
PDGFBP01127 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
PDGFBP01127 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PDGFBP01127 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PDGFBP01127 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.79■□□□□ 0.44
PDGFBP01127 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFBP01127 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFBP01127 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFBP01127 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFBP01127 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFBP01127 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.78■□□□□ 0.44
PDGFBP01127 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.78■□□□□ 0.44
PDGFBP01127 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.78■□□□□ 0.44
PDGFBP01127 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.78■□□□□ 0.44
PDGFBP01127 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.78■□□□□ 0.44
PDGFBP01127 AC005237.2-201ENST00000434368 219 ntBASIC17.78■□□□□ 0.44
PDGFBP01127 CNN2P2-201ENST00000443536 909 ntBASIC17.78■□□□□ 0.44
PDGFBP01127 CNN2P3-201ENST00000450201 906 ntBASIC17.78■□□□□ 0.44
PDGFBP01127 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 KRT8P48-201ENST00000515599 1220 ntBASIC17.78■□□□□ 0.44
PDGFBP01127 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.78■□□□□ 0.44
PDGFBP01127 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 AL136317.3-201ENST00000618497 906 ntBASIC17.78■□□□□ 0.44
PDGFBP01127 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PDGFBP01127 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PDGFBP01127 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFBP01127 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFBP01127 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PDGFBP01127 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.77■□□□□ 0.44
PDGFBP01127 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFBP01127 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.77■□□□□ 0.44
PDGFBP01127 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PDGFBP01127 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFBP01127 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFBP01127 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFBP01127 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.77■□□□□ 0.44
PDGFBP01127 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.77■□□□□ 0.44
PDGFBP01127 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.77■□□□□ 0.44
PDGFBP01127 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFBP01127 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFBP01127 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PDGFBP01127 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PDGFBP01127 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFBP01127 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms