Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CNOT4O95628 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CNOT4O95628 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
CNOT4O95628 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.84■□□□□ 0.13
CNOT4O95628 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.84■□□□□ 0.13
CNOT4O95628 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.84■□□□□ 0.13
CNOT4O95628 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.84■□□□□ 0.13
CNOT4O95628 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.84■□□□□ 0.13
CNOT4O95628 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.84■□□□□ 0.13
CNOT4O95628 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.84■□□□□ 0.13
CNOT4O95628 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CNOT4O95628 AC090164.3-201ENST00000610780 2143 ntBASIC15.84■□□□□ 0.13
CNOT4O95628 AL121772.3-201ENST00000610840 674 ntBASIC15.84■□□□□ 0.13
CNOT4O95628 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CNOT4O95628 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.84■□□□□ 0.13
CNOT4O95628 AC007613.1-201ENST00000572811 2597 ntBASIC15.84■□□□□ 0.13
CNOT4O95628 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.84■□□□□ 0.13
CNOT4O95628 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CNOT4O95628 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.84■□□□□ 0.13
CNOT4O95628 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CNOT4O95628 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CNOT4O95628 AC093677.2-201ENST00000600169 1863 ntBASIC15.84■□□□□ 0.13
CNOT4O95628 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.84■□□□□ 0.13
CNOT4O95628 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CNOT4O95628 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNOT4O95628 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
CNOT4O95628 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
CNOT4O95628 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CNOT4O95628 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.83■□□□□ 0.13
CNOT4O95628 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CNOT4O95628 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CNOT4O95628 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.83■□□□□ 0.13
CNOT4O95628 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CNOT4O95628 AC132938.6-201ENST00000623828 1655 ntBASIC15.83■□□□□ 0.13
CNOT4O95628 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CNOT4O95628 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CNOT4O95628 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CNOT4O95628 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CNOT4O95628 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNOT4O95628 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
CNOT4O95628 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNOT4O95628 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.83■□□□□ 0.12
CNOT4O95628 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNOT4O95628 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNOT4O95628 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNOT4O95628 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CNOT4O95628 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CNOT4O95628 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CNOT4O95628 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNOT4O95628 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNOT4O95628 AC112698.1-201ENST00000510299 916 ntBASIC15.83■□□□□ 0.12
CNOT4O95628 AC074051.2-201ENST00000565115 352 ntBASIC15.83■□□□□ 0.12
CNOT4O95628 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.83■□□□□ 0.12
CNOT4O95628 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CNOT4O95628 IFNL4P1-201ENST00000607083 540 ntBASIC15.83■□□□□ 0.12
CNOT4O95628 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CNOT4O95628 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.83■□□□□ 0.12
CNOT4O95628 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CNOT4O95628 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNOT4O95628 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.83■□□□□ 0.12
CNOT4O95628 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.83■□□□□ 0.12
CNOT4O95628 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNOT4O95628 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
CNOT4O95628 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.83■□□□□ 0.12
CNOT4O95628 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNOT4O95628 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CNOT4O95628 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CNOT4O95628 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.82■□□□□ 0.12
CNOT4O95628 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CNOT4O95628 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.82■□□□□ 0.12
CNOT4O95628 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CNOT4O95628 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CNOT4O95628 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms