Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 CR392000.1-201ENST00000624770 1228 ntBASIC14.65□□□□□ -0.06
SCAF4O95104 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SCAF4O95104 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SCAF4O95104 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SCAF4O95104 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
SCAF4O95104 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
SCAF4O95104 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SCAF4O95104 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SCAF4O95104 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SCAF4O95104 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SCAF4O95104 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SCAF4O95104 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SCAF4O95104 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SCAF4O95104 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SCAF4O95104 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SCAF4O95104 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SCAF4O95104 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SCAF4O95104 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.65□□□□□ -0.06
SCAF4O95104 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.65□□□□□ -0.07
SCAF4O95104 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.64□□□□□ -0.07
SCAF4O95104 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 AC006116.8-202ENST00000587620 1550 ntBASIC14.64□□□□□ -0.07
SCAF4O95104 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 AP001094.4-201ENST00000579008 2176 ntBASIC14.64□□□□□ -0.07
SCAF4O95104 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.64□□□□□ -0.07
SCAF4O95104 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.64□□□□□ -0.07
SCAF4O95104 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.64□□□□□ -0.07
SCAF4O95104 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.64□□□□□ -0.07
SCAF4O95104 FAM197Y1-201ENST00000421178 764 ntBASIC14.64□□□□□ -0.07
SCAF4O95104 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SCAF4O95104 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.64□□□□□ -0.07
SCAF4O95104 AC233702.5-201ENST00000584107 538 ntBASIC14.64□□□□□ -0.07
SCAF4O95104 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.64□□□□□ -0.07
SCAF4O95104 AL049637.2-201ENST00000641778 930 ntBASIC14.64□□□□□ -0.07
SCAF4O95104 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.64□□□□□ -0.07
SCAF4O95104 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SCAF4O95104 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SCAF4O95104 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.64□□□□□ -0.07
SCAF4O95104 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SCAF4O95104 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SCAF4O95104 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
SCAF4O95104 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCAF4O95104 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.64□□□□□ -0.07
SCAF4O95104 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
SCAF4O95104 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SCAF4O95104 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SCAF4O95104 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SCAF4O95104 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SCAF4O95104 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SCAF4O95104 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.63□□□□□ -0.07
SCAF4O95104 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.63□□□□□ -0.07
SCAF4O95104 AC068587.6-202ENST00000641839 5619 ntBASIC14.63□□□□□ -0.07
SCAF4O95104 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SCAF4O95104 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SCAF4O95104 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SCAF4O95104 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.63□□□□□ -0.07
SCAF4O95104 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SCAF4O95104 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SCAF4O95104 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
SCAF4O95104 NIFKP9-201ENST00000419265 221 ntBASIC14.63□□□□□ -0.07
SCAF4O95104 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.63□□□□□ -0.07
SCAF4O95104 SNORA78-201ENST00000459373 127 ntBASIC14.63□□□□□ -0.07
SCAF4O95104 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.63□□□□□ -0.07
SCAF4O95104 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SCAF4O95104 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.63□□□□□ -0.07
SCAF4O95104 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.63□□□□□ -0.07
SCAF4O95104 AC073195.1-201ENST00000607241 877 ntBASIC14.63□□□□□ -0.07
SCAF4O95104 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.63□□□□□ -0.07
SCAF4O95104 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.63□□□□□ -0.07
SCAF4O95104 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.63□□□□□ -0.07
SCAF4O95104 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SCAF4O95104 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SCAF4O95104 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SCAF4O95104 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.63□□□□□ -0.07
SCAF4O95104 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.63□□□□□ -0.07
SCAF4O95104 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SCAF4O95104 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SCAF4O95104 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SCAF4O95104 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms