Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.43■■□□□ 1.34
LTN1O94822 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LTN1O94822 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
LTN1O94822 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
LTN1O94822 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
LTN1O94822 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
LTN1O94822 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC23.42■■□□□ 1.34
LTN1O94822 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC23.42■■□□□ 1.34
LTN1O94822 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC23.42■■□□□ 1.34
LTN1O94822 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
LTN1O94822 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC23.42■■□□□ 1.34
LTN1O94822 AC097637.2-201ENST00000624096 1997 ntBASIC23.42■■□□□ 1.34
LTN1O94822 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
LTN1O94822 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.42■■□□□ 1.34
LTN1O94822 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
LTN1O94822 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
LTN1O94822 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
LTN1O94822 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
LTN1O94822 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC23.42■■□□□ 1.34
LTN1O94822 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC23.42■■□□□ 1.34
LTN1O94822 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
LTN1O94822 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
LTN1O94822 PRSS29P-201ENST00000440800 595 ntBASIC23.42■■□□□ 1.34
LTN1O94822 VN2R19P-201ENST00000442399 1052 ntBASIC23.42■■□□□ 1.34
LTN1O94822 AC087163.2-201ENST00000457299 853 ntBASIC23.42■■□□□ 1.34
LTN1O94822 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC23.42■■□□□ 1.34
LTN1O94822 AL031432.2-201ENST00000566714 459 ntBASIC23.42■■□□□ 1.34
LTN1O94822 AL928711.1-201ENST00000570165 459 ntBASIC23.42■■□□□ 1.34
LTN1O94822 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC23.42■■□□□ 1.34
LTN1O94822 AC004877.2-201ENST00000623941 599 ntBASIC23.42■■□□□ 1.34
LTN1O94822 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC23.42■■□□□ 1.34
LTN1O94822 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC23.42■■□□□ 1.34
LTN1O94822 AC093503.3-201ENST00000624917 2352 ntBASIC23.41■■□□□ 1.34
LTN1O94822 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
LTN1O94822 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC23.41■■□□□ 1.34
LTN1O94822 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
LTN1O94822 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC23.41■■□□□ 1.34
LTN1O94822 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
LTN1O94822 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
LTN1O94822 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
LTN1O94822 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC23.41■■□□□ 1.34
LTN1O94822 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
LTN1O94822 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
LTN1O94822 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC23.41■■□□□ 1.34
LTN1O94822 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
LTN1O94822 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
LTN1O94822 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
LTN1O94822 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
LTN1O94822 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC23.41■■□□□ 1.34
LTN1O94822 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
LTN1O94822 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
LTN1O94822 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
LTN1O94822 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
LTN1O94822 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC23.41■■□□□ 1.34
LTN1O94822 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
LTN1O94822 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
LTN1O94822 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
LTN1O94822 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
LTN1O94822 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
LTN1O94822 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
LTN1O94822 AC002558.1-201ENST00000488906 803 ntBASIC23.4■■□□□ 1.34
LTN1O94822 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC23.4■■□□□ 1.34
LTN1O94822 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC23.4■■□□□ 1.34
LTN1O94822 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC23.4■■□□□ 1.34
LTN1O94822 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
LTN1O94822 GGTLC5P-201ENST00000617623 998 ntBASIC23.4■■□□□ 1.34
LTN1O94822 CITED2-204ENST00000618718 901 ntTSL 2 BASIC23.4■■□□□ 1.34
LTN1O94822 ORC5-208ENST00000626700 344 ntTSL 3 BASIC23.4■■□□□ 1.34
LTN1O94822 AC079781.4-201ENST00000641908 219 ntBASIC23.4■■□□□ 1.34
LTN1O94822 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
LTN1O94822 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
LTN1O94822 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC23.4■■□□□ 1.34
LTN1O94822 IGHV3-52-201ENST00000519770 353 ntBASIC23.4■■□□□ 1.34
LTN1O94822 RPS15-207ENST00000591032 550 ntTSL 3 BASIC23.4■■□□□ 1.34
LTN1O94822 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC23.4■■□□□ 1.34
LTN1O94822 AC091812.2-201ENST00000619081 385 ntBASIC23.4■■□□□ 1.34
LTN1O94822 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
LTN1O94822 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
LTN1O94822 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC23.39■■□□□ 1.34
LTN1O94822 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC23.39■■□□□ 1.34
LTN1O94822 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LTN1O94822 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
LTN1O94822 REXO1L11P-201ENST00000620964 1927 ntBASIC23.39■■□□□ 1.33
LTN1O94822 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC23.39■■□□□ 1.33
LTN1O94822 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC23.39■■□□□ 1.33
LTN1O94822 PON3-203ENST00000427422 894 ntTSL 3 BASIC23.39■■□□□ 1.33
LTN1O94822 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
LTN1O94822 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LTN1O94822 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC23.39■■□□□ 1.33
LTN1O94822 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC23.39■■□□□ 1.33
LTN1O94822 AC116407.2-201ENST00000613639 860 ntBASIC23.39■■□□□ 1.33
LTN1O94822 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LTN1O94822 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
LTN1O94822 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
LTN1O94822 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
LTN1O94822 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LTN1O94822 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC23.38■■□□□ 1.33
LTN1O94822 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC23.38■■□□□ 1.33
LTN1O94822 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC23.38■■□□□ 1.33
LTN1O94822 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms