Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF254O75437 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.83■□□□□ 0.13
ZNF254O75437 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF254O75437 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF254O75437 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF254O75437 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.83■□□□□ 0.12
ZNF254O75437 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF254O75437 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF254O75437 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.12
ZNF254O75437 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF254O75437 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
ZNF254O75437 AP000523.1-201ENST00000398242 1049 ntBASIC15.83■□□□□ 0.12
ZNF254O75437 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
ZNF254O75437 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.83■□□□□ 0.12
ZNF254O75437 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.83■□□□□ 0.12
ZNF254O75437 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.83■□□□□ 0.12
ZNF254O75437 AL355075.4-201ENST00000554988 638 ntBASIC15.83■□□□□ 0.12
ZNF254O75437 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF254O75437 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
ZNF254O75437 MIR3917-201ENST00000580971 93 ntBASIC15.83■□□□□ 0.12
ZNF254O75437 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
ZNF254O75437 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
ZNF254O75437 AC024243.1-201ENST00000609234 778 ntBASIC15.83■□□□□ 0.12
ZNF254O75437 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.83■□□□□ 0.12
ZNF254O75437 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
ZNF254O75437 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF254O75437 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF254O75437 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
ZNF254O75437 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.83■□□□□ 0.12
ZNF254O75437 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.83■□□□□ 0.12
ZNF254O75437 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF254O75437 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
ZNF254O75437 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF254O75437 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.83■□□□□ 0.12
ZNF254O75437 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF254O75437 AC132938.6-201ENST00000623828 1655 ntBASIC15.83■□□□□ 0.12
ZNF254O75437 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.83■□□□□ 0.12
ZNF254O75437 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.82■□□□□ 0.12
ZNF254O75437 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ZNF254O75437 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
ZNF254O75437 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 AC009947.2-201ENST00000444014 672 ntBASIC15.82■□□□□ 0.12
ZNF254O75437 SNORA78-201ENST00000459373 127 ntBASIC15.82■□□□□ 0.12
ZNF254O75437 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.82■□□□□ 0.12
ZNF254O75437 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF254O75437 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF254O75437 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
ZNF254O75437 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF254O75437 NAPSB-206ENST00000562112 1266 ntBASIC15.82■□□□□ 0.12
ZNF254O75437 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF254O75437 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF254O75437 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.82■□□□□ 0.12
ZNF254O75437 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
ZNF254O75437 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF254O75437 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.82■□□□□ 0.12
ZNF254O75437 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.82■□□□□ 0.12
ZNF254O75437 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
ZNF254O75437 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF254O75437 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ZNF254O75437 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF254O75437 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF254O75437 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF254O75437 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ZNF254O75437 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF254O75437 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF254O75437 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF254O75437 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF254O75437 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF254O75437 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF254O75437 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.81■□□□□ 0.12
ZNF254O75437 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF254O75437 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ZNF254O75437 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms