Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMDSO60547 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
GMDSO60547 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMDSO60547 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMDSO60547 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMDSO60547 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMDSO60547 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMDSO60547 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMDSO60547 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMDSO60547 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
GMDSO60547 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
GMDSO60547 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GMDSO60547 LIN28AP1-201ENST00000429574 405 ntBASIC15.81■□□□□ 0.12
GMDSO60547 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
GMDSO60547 SLC25A3P1-201ENST00000443844 931 ntBASIC15.81■□□□□ 0.12
GMDSO60547 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.81■□□□□ 0.12
GMDSO60547 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GMDSO60547 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMDSO60547 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
GMDSO60547 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.81■□□□□ 0.12
GMDSO60547 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.81■□□□□ 0.12
GMDSO60547 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
GMDSO60547 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GMDSO60547 AC099343.3-201ENST00000605834 2503 ntBASIC15.81■□□□□ 0.12
GMDSO60547 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.81■□□□□ 0.12
GMDSO60547 AC012306.2-201ENST00000609350 630 ntBASIC15.81■□□□□ 0.12
GMDSO60547 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
GMDSO60547 AC018695.7-201ENST00000624587 2492 ntBASIC15.81■□□□□ 0.12
GMDSO60547 AC112497.1-201ENST00000624824 639 ntBASIC15.81■□□□□ 0.12
GMDSO60547 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
GMDSO60547 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
GMDSO60547 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
GMDSO60547 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GMDSO60547 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.8■□□□□ 0.12
GMDSO60547 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GMDSO60547 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.8■□□□□ 0.12
GMDSO60547 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.8■□□□□ 0.12
GMDSO60547 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
GMDSO60547 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GMDSO60547 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.8■□□□□ 0.12
GMDSO60547 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.8■□□□□ 0.12
GMDSO60547 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.8■□□□□ 0.12
GMDSO60547 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.8■□□□□ 0.12
GMDSO60547 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.8■□□□□ 0.12
GMDSO60547 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.8■□□□□ 0.12
GMDSO60547 LINC01023-201ENST00000606054 436 ntBASIC15.8■□□□□ 0.12
GMDSO60547 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
GMDSO60547 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.8■□□□□ 0.12
GMDSO60547 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.8■□□□□ 0.12
GMDSO60547 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.8■□□□□ 0.12
GMDSO60547 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GMDSO60547 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.8■□□□□ 0.12
GMDSO60547 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
GMDSO60547 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.8■□□□□ 0.12
GMDSO60547 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
GMDSO60547 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.8■□□□□ 0.12
GMDSO60547 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
GMDSO60547 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 FLJ13224-201ENST00000313737 1514 ntBASIC15.79■□□□□ 0.12
GMDSO60547 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
GMDSO60547 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
GMDSO60547 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 SDHAP2-201ENST00000455183 2001 ntBASIC15.79■□□□□ 0.12
GMDSO60547 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
GMDSO60547 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.79■□□□□ 0.12
GMDSO60547 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms