Protein–RNA interactions for Protein: O00505

KPNA3, Importin subunit alpha-4, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3O00505 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KPNA3O00505 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KPNA3O00505 AL355877.3-201ENST00000622820 899 ntBASIC17.91■□□□□ 0.46
KPNA3O00505 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.91■□□□□ 0.46
KPNA3O00505 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KPNA3O00505 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
KPNA3O00505 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.91■□□□□ 0.46
KPNA3O00505 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KPNA3O00505 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.91■□□□□ 0.46
KPNA3O00505 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KPNA3O00505 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.91■□□□□ 0.46
KPNA3O00505 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KPNA3O00505 AC010460.3-201ENST00000511359 1579 ntBASIC17.91■□□□□ 0.46
KPNA3O00505 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KPNA3O00505 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.91■□□□□ 0.46
KPNA3O00505 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.91■□□□□ 0.46
KPNA3O00505 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KPNA3O00505 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KPNA3O00505 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KPNA3O00505 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
KPNA3O00505 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KPNA3O00505 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.9■□□□□ 0.46
KPNA3O00505 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.9■□□□□ 0.46
KPNA3O00505 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.9■□□□□ 0.46
KPNA3O00505 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
KPNA3O00505 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KPNA3O00505 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KPNA3O00505 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.9■□□□□ 0.46
KPNA3O00505 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
KPNA3O00505 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KPNA3O00505 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KPNA3O00505 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.9■□□□□ 0.46
KPNA3O00505 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
KPNA3O00505 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KPNA3O00505 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KPNA3O00505 AC096633.1-201ENST00000422446 749 ntBASIC17.9■□□□□ 0.46
KPNA3O00505 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.9■□□□□ 0.46
KPNA3O00505 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.9■□□□□ 0.46
KPNA3O00505 AC106795.1-205ENST00000512851 1056 ntBASIC17.9■□□□□ 0.46
KPNA3O00505 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.9■□□□□ 0.46
KPNA3O00505 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
KPNA3O00505 AC064862.7-201ENST00000604520 867 ntBASIC17.9■□□□□ 0.46
KPNA3O00505 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.9■□□□□ 0.46
KPNA3O00505 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KPNA3O00505 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.9■□□□□ 0.46
KPNA3O00505 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KPNA3O00505 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.9■□□□□ 0.46
KPNA3O00505 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KPNA3O00505 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KPNA3O00505 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.9■□□□□ 0.46
KPNA3O00505 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.9■□□□□ 0.46
KPNA3O00505 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
KPNA3O00505 AP005117.1-201ENST00000584346 1413 ntBASIC17.89■□□□□ 0.46
KPNA3O00505 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
KPNA3O00505 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
KPNA3O00505 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
KPNA3O00505 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
KPNA3O00505 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA3O00505 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA3O00505 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA3O00505 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.89■□□□□ 0.45
KPNA3O00505 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA3O00505 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
KPNA3O00505 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA3O00505 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA3O00505 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA3O00505 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.89■□□□□ 0.45
KPNA3O00505 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
KPNA3O00505 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA3O00505 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA3O00505 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.89■□□□□ 0.45
KPNA3O00505 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.89■□□□□ 0.45
KPNA3O00505 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA3O00505 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.89■□□□□ 0.45
KPNA3O00505 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.89■□□□□ 0.45
KPNA3O00505 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA3O00505 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.89■□□□□ 0.45
KPNA3O00505 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.89■□□□□ 0.45
KPNA3O00505 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.89■□□□□ 0.45
KPNA3O00505 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
KPNA3O00505 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.89■□□□□ 0.45
KPNA3O00505 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
KPNA3O00505 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA3O00505 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
KPNA3O00505 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.89■□□□□ 0.45
KPNA3O00505 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.89■□□□□ 0.45
KPNA3O00505 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA3O00505 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
KPNA3O00505 AC100803.2-201ENST00000562459 1963 ntBASIC17.89■□□□□ 0.45
KPNA3O00505 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.89■□□□□ 0.45
KPNA3O00505 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
KPNA3O00505 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.89■□□□□ 0.45
KPNA3O00505 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA3O00505 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.89■□□□□ 0.45
KPNA3O00505 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA3O00505 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA3O00505 AP000997.3-201ENST00000623333 2250 ntBASIC17.88■□□□□ 0.45
KPNA3O00505 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA3O00505 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA3O00505 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms