Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX39AO00148 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
DDX39AO00148 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX39AO00148 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.04■□□□□ 0.8
DDX39AO00148 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX39AO00148 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX39AO00148 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX39AO00148 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.04■□□□□ 0.8
DDX39AO00148 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX39AO00148 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.04■□□□□ 0.8
DDX39AO00148 AC104692.2-201ENST00000603054 253 ntBASIC20.04■□□□□ 0.8
DDX39AO00148 AL121912.1-201ENST00000603683 238 ntBASIC20.04■□□□□ 0.8
DDX39AO00148 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.04■□□□□ 0.8
DDX39AO00148 AP001269.4-201ENST00000609611 512 ntBASIC20.04■□□□□ 0.8
DDX39AO00148 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.04■□□□□ 0.8
DDX39AO00148 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX39AO00148 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
DDX39AO00148 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX39AO00148 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX39AO00148 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX39AO00148 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
DDX39AO00148 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX39AO00148 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
DDX39AO00148 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
DDX39AO00148 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX39AO00148 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX39AO00148 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX39AO00148 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDX39AO00148 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX39AO00148 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
DDX39AO00148 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX39AO00148 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX39AO00148 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX39AO00148 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX39AO00148 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX39AO00148 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.03■□□□□ 0.8
DDX39AO00148 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX39AO00148 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX39AO00148 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX39AO00148 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.03■□□□□ 0.8
DDX39AO00148 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX39AO00148 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.03■□□□□ 0.8
DDX39AO00148 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.03■□□□□ 0.8
DDX39AO00148 TP73-AS1-207ENST00000624167 988 ntBASIC20.03■□□□□ 0.8
DDX39AO00148 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX39AO00148 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDX39AO00148 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX39AO00148 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX39AO00148 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
DDX39AO00148 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
DDX39AO00148 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX39AO00148 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
DDX39AO00148 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX39AO00148 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX39AO00148 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX39AO00148 KRT8P10-201ENST00000450021 1447 ntBASIC20.02■□□□□ 0.8
DDX39AO00148 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
DDX39AO00148 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
DDX39AO00148 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.02■□□□□ 0.8
DDX39AO00148 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
DDX39AO00148 AC009949.1-201ENST00000623048 1830 ntBASIC20.02■□□□□ 0.8
DDX39AO00148 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX39AO00148 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
DDX39AO00148 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
DDX39AO00148 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX39AO00148 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
DDX39AO00148 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX39AO00148 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX39AO00148 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
DDX39AO00148 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX39AO00148 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX39AO00148 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX39AO00148 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.02■□□□□ 0.8
DDX39AO00148 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.02■□□□□ 0.8
DDX39AO00148 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.02■□□□□ 0.8
DDX39AO00148 AC008608.2-201ENST00000606089 416 ntBASIC20.02■□□□□ 0.8
DDX39AO00148 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX39AO00148 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
DDX39AO00148 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX39AO00148 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX39AO00148 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
DDX39AO00148 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
DDX39AO00148 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.02■□□□□ 0.79
DDX39AO00148 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.02■□□□□ 0.79
DDX39AO00148 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
DDX39AO00148 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
DDX39AO00148 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
DDX39AO00148 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.01■□□□□ 0.79
DDX39AO00148 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX39AO00148 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX39AO00148 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.01■□□□□ 0.79
DDX39AO00148 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX39AO00148 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDX39AO00148 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.01■□□□□ 0.79
DDX39AO00148 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDX39AO00148 AL160237.2-201ENST00000556165 472 ntBASIC20.01■□□□□ 0.79
DDX39AO00148 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.01■□□□□ 0.79
DDX39AO00148 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.01■□□□□ 0.79
DDX39AO00148 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.01■□□□□ 0.79
DDX39AO00148 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms