Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRIM49D1C9J1S8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM49D1C9J1S8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRIM49D1C9J1S8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRIM49D1C9J1S8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 REXO1L11P-201ENST00000620964 1927 ntBASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 TSPY7P-201ENST00000431358 1114 ntBASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 AC008687.5-201ENST00000593746 558 ntBASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM49D1C9J1S8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 INGX-201ENST00000359239 846 ntBASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 AC009947.2-201ENST00000444014 672 ntBASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRIM49D1C9J1S8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM49D1C9J1S8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM49D1C9J1S8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM49D1C9J1S8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM49D1C9J1S8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM49D1C9J1S8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM49D1C9J1S8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM49D1C9J1S8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
TRIM49D1C9J1S8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM49D1C9J1S8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM49D1C9J1S8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM49D1C9J1S8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM49D1C9J1S8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM49D1C9J1S8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM49D1C9J1S8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM49D1C9J1S8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms