Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 MIR770-201ENST00000390219 98 ntBASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 PTCHD3P3-201ENST00000403073 906 ntBASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 AC004461.1-201ENST00000412461 403 ntBASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 AC109322.1-201ENST00000524499 1264 ntBASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 AC005498.2-205ENST00000593218 784 ntBASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC26.73■■□□□ 1.87
CDC42BPBQ9Y5S2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC26.72■■□□□ 1.87
CDC42BPBQ9Y5S2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDC42BPBQ9Y5S2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CDC42BPBQ9Y5S2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CDC42BPBQ9Y5S2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC26.72■■□□□ 1.87
CDC42BPBQ9Y5S2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC26.72■■□□□ 1.87
CDC42BPBQ9Y5S2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC26.72■■□□□ 1.87
CDC42BPBQ9Y5S2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC26.72■■□□□ 1.87
CDC42BPBQ9Y5S2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
CDC42BPBQ9Y5S2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDC42BPBQ9Y5S2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDC42BPBQ9Y5S2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 AC023141.5-201ENST00000458585 616 ntBASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 POR-209ENST00000439269 1858 ntTSL 2 BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC26.71■■□□□ 1.87
CDC42BPBQ9Y5S2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
CDC42BPBQ9Y5S2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC26.7■■□□□ 1.87
CDC42BPBQ9Y5S2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC26.7■■□□□ 1.87
CDC42BPBQ9Y5S2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC26.7■■□□□ 1.87
CDC42BPBQ9Y5S2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC26.7■■□□□ 1.87
CDC42BPBQ9Y5S2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
CDC42BPBQ9Y5S2 AC097637.2-201ENST00000624096 1997 ntBASIC26.7■■□□□ 1.87
CDC42BPBQ9Y5S2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC26.7■■□□□ 1.86
CDC42BPBQ9Y5S2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CDC42BPBQ9Y5S2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CDC42BPBQ9Y5S2 AC092919.2-201ENST00000623631 1645 ntBASIC26.7■■□□□ 1.86
CDC42BPBQ9Y5S2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC26.7■■□□□ 1.86
CDC42BPBQ9Y5S2 AC093677.2-201ENST00000600169 1863 ntBASIC26.7■■□□□ 1.86
CDC42BPBQ9Y5S2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
CDC42BPBQ9Y5S2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC26.7■■□□□ 1.86
CDC42BPBQ9Y5S2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CDC42BPBQ9Y5S2 MED16-214ENST00000617672 554 ntTSL 5 BASIC26.7■■□□□ 1.86
CDC42BPBQ9Y5S2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CDC42BPBQ9Y5S2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CDC42BPBQ9Y5S2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
CDC42BPBQ9Y5S2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 AL096865.1-201ENST00000606796 927 ntBASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 AC009093.7-201ENST00000623853 1223 ntBASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms