Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 FAM197Y4-202ENST00000622692 608 ntBASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 AC112497.1-201ENST00000624824 639 ntBASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 AL118508.1-201ENST00000613502 2345 ntBASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 AP003041.3-201ENST00000527151 707 ntBASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 LINC01451-201ENST00000623792 534 ntBASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBE2D4Q9Y2X8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 AC008687.5-201ENST00000593746 558 ntBASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 AC092666.2-201ENST00000613287 246 ntBASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 AC116407.2-201ENST00000613639 860 ntBASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms