Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PIF1Q9H611 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
PIF1Q9H611 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.08■□□□□ 0.33
PIF1Q9H611 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PIF1Q9H611 LINC00602-201ENST00000629776 2065 ntBASIC17.08■□□□□ 0.33
PIF1Q9H611 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
PIF1Q9H611 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PIF1Q9H611 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PIF1Q9H611 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PIF1Q9H611 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PIF1Q9H611 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PIF1Q9H611 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.08■□□□□ 0.32
PIF1Q9H611 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PIF1Q9H611 AL355355.2-201ENST00000442321 338 ntBASIC17.08■□□□□ 0.32
PIF1Q9H611 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.08■□□□□ 0.32
PIF1Q9H611 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.08■□□□□ 0.32
PIF1Q9H611 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PIF1Q9H611 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PIF1Q9H611 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PIF1Q9H611 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.08■□□□□ 0.32
PIF1Q9H611 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PIF1Q9H611 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PIF1Q9H611 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PIF1Q9H611 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.07■□□□□ 0.32
PIF1Q9H611 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PIF1Q9H611 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 CROCCP2-202ENST00000412962 2773 ntBASIC17.07■□□□□ 0.32
PIF1Q9H611 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
PIF1Q9H611 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.07■□□□□ 0.32
PIF1Q9H611 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PIF1Q9H611 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PIF1Q9H611 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.07■□□□□ 0.32
PIF1Q9H611 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.07■□□□□ 0.32
PIF1Q9H611 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.07■□□□□ 0.32
PIF1Q9H611 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.07■□□□□ 0.32
PIF1Q9H611 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PIF1Q9H611 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.06■□□□□ 0.32
PIF1Q9H611 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.06■□□□□ 0.32
PIF1Q9H611 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.06■□□□□ 0.32
PIF1Q9H611 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PIF1Q9H611 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.06■□□□□ 0.32
PIF1Q9H611 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PIF1Q9H611 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.06■□□□□ 0.32
PIF1Q9H611 AL024508.2-201ENST00000607749 1894 ntBASIC17.06■□□□□ 0.32
PIF1Q9H611 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PIF1Q9H611 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PIF1Q9H611 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.06■□□□□ 0.32
PIF1Q9H611 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.06■□□□□ 0.32
PIF1Q9H611 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.06■□□□□ 0.32
PIF1Q9H611 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.06■□□□□ 0.32
PIF1Q9H611 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.06■□□□□ 0.32
PIF1Q9H611 AC026471.5-201ENST00000615068 467 ntBASIC17.06■□□□□ 0.32
PIF1Q9H611 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PIF1Q9H611 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.06■□□□□ 0.32
PIF1Q9H611 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PIF1Q9H611 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PIF1Q9H611 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.06■□□□□ 0.32
PIF1Q9H611 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
PIF1Q9H611 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PIF1Q9H611 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.05■□□□□ 0.32
PIF1Q9H611 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PIF1Q9H611 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.05■□□□□ 0.32
PIF1Q9H611 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms