Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 DUTP2-201ENST00000519164 463 ntBASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 AC011558.1-201ENST00000623459 338 ntBASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC68Q9H2F9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 LINC00602-201ENST00000629776 2065 ntBASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 STARP1-201ENST00000397973 869 ntBASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 KRT18P57-201ENST00000443599 1254 ntBASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 AC113404.2-201ENST00000507884 177 ntBASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 AL391807.1-203ENST00000604392 2365 ntBASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC68Q9H2F9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 KRT89P-201ENST00000620027 1478 ntBASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 AC132938.6-201ENST00000623828 1655 ntBASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCDC68Q9H2F9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.89■□□□□ 0.46
CCDC68Q9H2F9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC68Q9H2F9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC68Q9H2F9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms