Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 MIR3180-4-201ENST00000582223 153 ntBASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 AL138688.1-201ENST00000624851 1594 ntBASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.71■□□□□ 0.27
AMBRA1Q9C0C7 KRT18P22-201ENST00000402024 1347 ntBASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 AC092338.2-201ENST00000568827 1415 ntBASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 AC100803.2-201ENST00000562459 1963 ntBASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 AC132938.6-201ENST00000623828 1655 ntBASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 DUTP2-201ENST00000519164 463 ntBASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AMBRA1Q9C0C7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 ARMC10P1-201ENST00000313754 855 ntBASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 CCR12P-201ENST00000446203 998 ntBASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 AC128688.1-201ENST00000487626 519 ntBASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 AC010653.2-201ENST00000623505 997 ntBASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 AC116562.4-202ENST00000641738 218 ntBASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
AMBRA1Q9C0C7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms