Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 UBALD1-205ENST00000590891 2641 ntBASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CYP2T1P-201ENST00000432607 1285 ntBASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PNN-205ENST00000556530 601 ntTSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PHGDH-209ENST00000641074 1780 ntBASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 AL162727.3-201ENST00000635661 2787 ntBASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms