Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.64■■□□□ 1.05
RPAP1Q9BWH6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RPAP1Q9BWH6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPAP1Q9BWH6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPAP1Q9BWH6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RPAP1Q9BWH6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RPAP1Q9BWH6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 KRT18P65-201ENST00000439811 1286 ntBASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 AC008608.2-201ENST00000606089 416 ntBASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP1Q9BWH6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 MIR5100-201ENST00000579544 119 ntBASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 AC009154.2-201ENST00000621177 724 ntBASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 IL9RP2-201ENST00000423948 1312 ntBASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP1Q9BWH6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 FAM197Y8-203ENST00000450145 560 ntBASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 MIR7706-201ENST00000613747 67 ntBASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 AC020916.1-201ENST00000587762 1774 ntBASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 AC132938.6-201ENST00000623828 1655 ntBASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms