Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 MIR6787-201ENST00000616675 61 ntBASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.67■□□□□ 0.42
LRFN3Q9BTN0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 SDHAP2-201ENST00000455183 2001 ntBASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 FAM185BP-201ENST00000443595 716 ntBASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 AC106886.1-201ENST00000568660 600 ntBASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 GPR182-203ENST00000622922 591 ntBASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN3Q9BTN0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 AC096633.1-201ENST00000422446 749 ntBASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 KRT8P23-201ENST00000560090 1207 ntBASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 MIR4538-201ENST00000581377 78 ntBASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 AC003101.2-201ENST00000612557 442 ntBASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN3Q9BTN0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRFN3Q9BTN0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
LRFN3Q9BTN0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms