Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 PCDHA12-202ENST00000613593 2588 ntBASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 AP000523.1-201ENST00000398242 1049 ntBASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 AC113404.2-201ENST00000507884 177 ntBASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 OR6D1P-203ENST00000641209 4860 ntBASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 AD000864.1-201ENST00000624076 2295 ntBASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 SNORA78-201ENST00000459373 127 ntBASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 NAPSB-206ENST00000562112 1266 ntBASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHANK2-AS3Q9BTD1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHANK2-AS3Q9BTD1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms