Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.56□□□□□ -0.24
VGLL1Q99990 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.56□□□□□ -0.24
VGLL1Q99990 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.56□□□□□ -0.24
VGLL1Q99990 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.56□□□□□ -0.24
VGLL1Q99990 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.56□□□□□ -0.24
VGLL1Q99990 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 GCSHP5-201ENST00000443090 522 ntBASIC13.56□□□□□ -0.24
VGLL1Q99990 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.56□□□□□ -0.24
VGLL1Q99990 AP003071.4-201ENST00000562276 1284 ntBASIC13.56□□□□□ -0.24
VGLL1Q99990 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.56□□□□□ -0.24
VGLL1Q99990 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
VGLL1Q99990 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.56□□□□□ -0.24
VGLL1Q99990 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
VGLL1Q99990 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.56□□□□□ -0.24
VGLL1Q99990 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
VGLL1Q99990 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
VGLL1Q99990 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
VGLL1Q99990 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.55□□□□□ -0.24
VGLL1Q99990 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.55□□□□□ -0.24
VGLL1Q99990 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
VGLL1Q99990 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.55□□□□□ -0.24
VGLL1Q99990 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.55□□□□□ -0.24
VGLL1Q99990 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
VGLL1Q99990 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.55□□□□□ -0.24
VGLL1Q99990 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.55□□□□□ -0.24
VGLL1Q99990 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.55□□□□□ -0.24
VGLL1Q99990 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.55□□□□□ -0.24
VGLL1Q99990 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.55□□□□□ -0.24
VGLL1Q99990 AL513477.1-201ENST00000602865 2407 ntBASIC13.55□□□□□ -0.24
VGLL1Q99990 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
VGLL1Q99990 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
VGLL1Q99990 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
VGLL1Q99990 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
VGLL1Q99990 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
VGLL1Q99990 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.55□□□□□ -0.24
VGLL1Q99990 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.55□□□□□ -0.24
VGLL1Q99990 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 PKD1P5-201ENST00000532415 10291 ntBASIC13.55□□□□□ -0.24
VGLL1Q99990 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VGLL1Q99990 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
VGLL1Q99990 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.54□□□□□ -0.24
VGLL1Q99990 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
VGLL1Q99990 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.54□□□□□ -0.24
VGLL1Q99990 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 AC132938.6-201ENST00000623828 1655 ntBASIC13.54□□□□□ -0.24
VGLL1Q99990 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
VGLL1Q99990 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms