Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.19■□□□□ 0.34
CDC6Q99741 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDC6Q99741 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC6Q99741 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC6Q99741 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC6Q99741 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.18■□□□□ 0.34
CDC6Q99741 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.18■□□□□ 0.34
CDC6Q99741 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDC6Q99741 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC6Q99741 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC6Q99741 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.18■□□□□ 0.34
CDC6Q99741 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.18■□□□□ 0.34
CDC6Q99741 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.18■□□□□ 0.34
CDC6Q99741 PRSS29P-201ENST00000440800 595 ntBASIC17.18■□□□□ 0.34
CDC6Q99741 VN2R19P-201ENST00000442399 1052 ntBASIC17.18■□□□□ 0.34
CDC6Q99741 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDC6Q99741 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC6Q99741 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.18■□□□□ 0.34
CDC6Q99741 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDC6Q99741 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CDC6Q99741 MIR4751-201ENST00000578027 74 ntBASIC17.18■□□□□ 0.34
CDC6Q99741 AC004706.3-202ENST00000621574 984 ntBASIC17.18■□□□□ 0.34
CDC6Q99741 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.18■□□□□ 0.34
CDC6Q99741 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDC6Q99741 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.18■□□□□ 0.34
CDC6Q99741 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC6Q99741 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC6Q99741 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.18■□□□□ 0.34
CDC6Q99741 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC6Q99741 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC6Q99741 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC6Q99741 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC6Q99741 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDC6Q99741 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDC6Q99741 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDC6Q99741 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC6Q99741 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC6Q99741 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CDC6Q99741 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC6Q99741 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC6Q99741 AL158211.5-201ENST00000623583 2518 ntBASIC17.17■□□□□ 0.34
CDC6Q99741 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDC6Q99741 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC6Q99741 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.17■□□□□ 0.34
CDC6Q99741 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.17■□□□□ 0.34
CDC6Q99741 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.17■□□□□ 0.34
CDC6Q99741 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDC6Q99741 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
CDC6Q99741 ALG1L5P-201ENST00000482043 771 ntBASIC17.17■□□□□ 0.34
CDC6Q99741 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDC6Q99741 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.17■□□□□ 0.34
CDC6Q99741 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.17■□□□□ 0.34
CDC6Q99741 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDC6Q99741 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC6Q99741 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CDC6Q99741 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.17■□□□□ 0.34
CDC6Q99741 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CDC6Q99741 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC6Q99741 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC6Q99741 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDC6Q99741 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
CDC6Q99741 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 AL161938.1-201ENST00000569833 2180 ntBASIC17.16■□□□□ 0.34
CDC6Q99741 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.16■□□□□ 0.34
CDC6Q99741 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.16■□□□□ 0.34
CDC6Q99741 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 AL020989.1-201ENST00000422979 469 ntBASIC17.16■□□□□ 0.34
CDC6Q99741 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.16■□□□□ 0.34
CDC6Q99741 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CDC6Q99741 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.16■□□□□ 0.34
CDC6Q99741 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDC6Q99741 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.16■□□□□ 0.34
CDC6Q99741 AC004817.3-201ENST00000602957 2129 ntBASIC17.16■□□□□ 0.34
CDC6Q99741 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDC6Q99741 AC073592.5-201ENST00000624854 528 ntBASIC17.16■□□□□ 0.34
CDC6Q99741 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.16■□□□□ 0.34
CDC6Q99741 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.16■□□□□ 0.34
CDC6Q99741 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.16■□□□□ 0.34
CDC6Q99741 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.16■□□□□ 0.34
CDC6Q99741 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CDC6Q99741 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.16■□□□□ 0.34
CDC6Q99741 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.16■□□□□ 0.34
CDC6Q99741 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.16■□□□□ 0.34
CDC6Q99741 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC6Q99741 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDC6Q99741 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms