Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CHMP6Q96FZ7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP6Q96FZ7 SDHAP2-201ENST00000455183 2001 ntBASIC18■□□□□ 0.47
CHMP6Q96FZ7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18■□□□□ 0.47
CHMP6Q96FZ7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP6Q96FZ7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18■□□□□ 0.47
CHMP6Q96FZ7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP6Q96FZ7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18■□□□□ 0.47
CHMP6Q96FZ7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18■□□□□ 0.47
CHMP6Q96FZ7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18■□□□□ 0.47
CHMP6Q96FZ7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
CHMP6Q96FZ7 MTDHP1-201ENST00000605323 784 ntBASIC18■□□□□ 0.47
CHMP6Q96FZ7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18■□□□□ 0.47
CHMP6Q96FZ7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18■□□□□ 0.47
CHMP6Q96FZ7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18■□□□□ 0.47
CHMP6Q96FZ7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP6Q96FZ7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18■□□□□ 0.47
CHMP6Q96FZ7 AL596257.1-201ENST00000641463 2694 ntBASIC18■□□□□ 0.47
CHMP6Q96FZ7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP6Q96FZ7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP6Q96FZ7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 AC008741.2-201ENST00000612792 3115 ntBASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CHMP6Q96FZ7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 LINC02199-201ENST00000506655 2702 ntBASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 LINC00304-203ENST00000565008 1864 ntBASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP6Q96FZ7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 MIR564-202ENST00000385049 94 ntBASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms