Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
TRIM11Q96F44 AC092597.1-201ENST00000487352 616 ntBASIC18.89■□□□□ 0.61
TRIM11Q96F44 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM11Q96F44 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.89■□□□□ 0.61
TRIM11Q96F44 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM11Q96F44 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
TRIM11Q96F44 LINC01023-201ENST00000606054 436 ntBASIC18.89■□□□□ 0.61
TRIM11Q96F44 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRIM11Q96F44 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRIM11Q96F44 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM11Q96F44 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM11Q96F44 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM11Q96F44 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM11Q96F44 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM11Q96F44 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM11Q96F44 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM11Q96F44 PKD1P1-201ENST00000458669 6805 ntBASIC18.89■□□□□ 0.61
TRIM11Q96F44 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM11Q96F44 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TRIM11Q96F44 SIRPAP1-201ENST00000448467 1770 ntBASIC18.88■□□□□ 0.61
TRIM11Q96F44 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM11Q96F44 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM11Q96F44 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM11Q96F44 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM11Q96F44 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM11Q96F44 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM11Q96F44 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 GPR32P1-201ENST00000601788 811 ntBASIC18.88■□□□□ 0.61
TRIM11Q96F44 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM11Q96F44 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM11Q96F44 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM11Q96F44 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM11Q96F44 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM11Q96F44 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM11Q96F44 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.88■□□□□ 0.61
TRIM11Q96F44 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM11Q96F44 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM11Q96F44 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM11Q96F44 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM11Q96F44 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM11Q96F44 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM11Q96F44 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM11Q96F44 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.87■□□□□ 0.61
TRIM11Q96F44 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM11Q96F44 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM11Q96F44 HBZP1-201ENST00000354915 429 ntBASIC18.87■□□□□ 0.61
TRIM11Q96F44 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM11Q96F44 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM11Q96F44 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM11Q96F44 KRT18P57-201ENST00000443599 1254 ntBASIC18.87■□□□□ 0.61
TRIM11Q96F44 AC092647.4-201ENST00000457211 535 ntBASIC18.87■□□□□ 0.61
TRIM11Q96F44 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.87■□□□□ 0.61
TRIM11Q96F44 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM11Q96F44 AC112698.1-201ENST00000510299 916 ntBASIC18.87■□□□□ 0.61
TRIM11Q96F44 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM11Q96F44 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
TRIM11Q96F44 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM11Q96F44 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
TRIM11Q96F44 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM11Q96F44 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TRIM11Q96F44 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM11Q96F44 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TRIM11Q96F44 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM11Q96F44 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
TRIM11Q96F44 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM11Q96F44 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRIM11Q96F44 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM11Q96F44 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TRIM11Q96F44 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 AL353692.3-201ENST00000407031 1396 ntBASIC18.86■□□□□ 0.61
TRIM11Q96F44 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 AK4P3-201ENST00000418260 669 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms