Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 AC068472.1-201ENST00000474589 881 ntBASIC15.64■□□□□ 0.09
CPEB3Q8NE35 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 KRT8P26-201ENST00000534154 1276 ntBASIC15.64■□□□□ 0.09
CPEB3Q8NE35 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CPEB3Q8NE35 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 IER3-202ENST00000376377 1350 ntBASIC15.63■□□□□ 0.09
CPEB3Q8NE35 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 LTB4R2-202ENST00000528054 3092 ntBASIC15.63■□□□□ 0.09
CPEB3Q8NE35 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 SLC25A6P5-201ENST00000435663 894 ntBASIC15.63■□□□□ 0.09
CPEB3Q8NE35 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 AC067852.2-201ENST00000590513 2313 ntBASIC15.63■□□□□ 0.09
CPEB3Q8NE35 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.63■□□□□ 0.09
CPEB3Q8NE35 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 MTCL1P1-201ENST00000446207 792 ntBASIC15.62■□□□□ 0.09
CPEB3Q8NE35 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 AC112698.1-201ENST00000510299 916 ntBASIC15.62■□□□□ 0.09
CPEB3Q8NE35 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 AP000550.4-202ENST00000639755 178 ntBASIC15.62■□□□□ 0.09
CPEB3Q8NE35 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.62■□□□□ 0.09
CPEB3Q8NE35 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms