Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 AC068418.2-201ENST00000577309 3703 ntBASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 KRT8P9-201ENST00000558927 1449 ntBASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 AL137013.1-201ENST00000432946 1228 ntBASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 MFAP1P1-201ENST00000442257 1255 ntBASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 ATP5G1P1-201ENST00000448724 379 ntBASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 AC010947.1-201ENST00000623454 693 ntBASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 AC116562.4-202ENST00000641738 218 ntBASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
DEPDC4Q8N2C3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.64■□□□□ 0.26
DEPDC4Q8N2C3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
DEPDC4Q8N2C3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 AL121761.2-201ENST00000598007 1648 ntBASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 AC091390.4-202ENST00000476426 537 ntBASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 CYP2D8P-201ENST00000433633 1490 ntBASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
DEPDC4Q8N2C3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 TSPY14P-201ENST00000303979 915 ntBASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 AC092865.7-201ENST00000641832 219 ntBASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
DEPDC4Q8N2C3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms