Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 HLA-DRB6-201ENST00000411500 1235 ntBASIC25.15■■□□□ 1.62
UBR1Q8IWV7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 AC112191.1-201ENST00000523689 701 ntBASIC25.15■■□□□ 1.62
UBR1Q8IWV7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 AC100803.2-201ENST00000562459 1963 ntBASIC25.15■■□□□ 1.62
UBR1Q8IWV7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 LINC00982-205ENST00000420957 435 ntBASIC25.15■■□□□ 1.62
UBR1Q8IWV7 KRT18P32-201ENST00000424695 1287 ntBASIC25.15■■□□□ 1.62
UBR1Q8IWV7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 KRT8P48-201ENST00000515599 1220 ntBASIC25.15■■□□□ 1.62
UBR1Q8IWV7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
UBR1Q8IWV7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
UBR1Q8IWV7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
UBR1Q8IWV7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC25.14■■□□□ 1.62
UBR1Q8IWV7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC25.14■■□□□ 1.62
UBR1Q8IWV7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC25.14■■□□□ 1.62
UBR1Q8IWV7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
UBR1Q8IWV7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
UBR1Q8IWV7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
UBR1Q8IWV7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
UBR1Q8IWV7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
UBR1Q8IWV7 AC005332.7-201ENST00000614046 2005 ntBASIC25.14■■□□□ 1.62
UBR1Q8IWV7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
UBR1Q8IWV7 AC002472.2-201ENST00000442739 958 ntBASIC25.14■■□□□ 1.61
UBR1Q8IWV7 TIMM8BP1-201ENST00000452384 211 ntBASIC25.14■■□□□ 1.61
UBR1Q8IWV7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC25.14■■□□□ 1.61
UBR1Q8IWV7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC25.14■■□□□ 1.61
UBR1Q8IWV7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.61
UBR1Q8IWV7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
UBR1Q8IWV7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
UBR1Q8IWV7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.61
UBR1Q8IWV7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC25.13■■□□□ 1.61
UBR1Q8IWV7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
UBR1Q8IWV7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
UBR1Q8IWV7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC25.13■■□□□ 1.61
UBR1Q8IWV7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC25.13■■□□□ 1.61
UBR1Q8IWV7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
UBR1Q8IWV7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
UBR1Q8IWV7 AC005034.1-201ENST00000426657 489 ntBASIC25.13■■□□□ 1.61
UBR1Q8IWV7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
UBR1Q8IWV7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC25.13■■□□□ 1.61
UBR1Q8IWV7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC25.13■■□□□ 1.61
UBR1Q8IWV7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC25.13■■□□□ 1.61
UBR1Q8IWV7 DUX4L27-201ENST00000554796 1261 ntBASIC25.13■■□□□ 1.61
UBR1Q8IWV7 AC005225.4-201ENST00000557330 545 ntBASIC25.13■■□□□ 1.61
UBR1Q8IWV7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC25.13■■□□□ 1.61
UBR1Q8IWV7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
UBR1Q8IWV7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
UBR1Q8IWV7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
UBR1Q8IWV7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
UBR1Q8IWV7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 DUT-210ENST00000559935 569 ntTSL 3 BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 GPS2P2-201ENST00000430745 888 ntBASIC25.12■■□□□ 1.61
UBR1Q8IWV7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 AC007274.1-201ENST00000439805 662 ntBASIC25.12■■□□□ 1.61
UBR1Q8IWV7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
UBR1Q8IWV7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 AFG3L1P-217ENST00000557444 2447 ntBASIC25.11■■□□□ 1.61
UBR1Q8IWV7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms