Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 AC087641.1-201ENST00000557561 1021 ntBASIC22.25■■□□□ 1.15
COL23A1Q86Y22 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 AL353135.1-201ENST00000606729 504 ntBASIC22.25■■□□□ 1.15
COL23A1Q86Y22 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 AC073130.3-201ENST00000624389 2278 ntBASIC22.25■■□□□ 1.15
COL23A1Q86Y22 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL23A1Q86Y22 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL23A1Q86Y22 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
COL23A1Q86Y22 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL23A1Q86Y22 AL627223.1-201ENST00000416693 442 ntBASIC22.24■■□□□ 1.15
COL23A1Q86Y22 CXCL1P1-201ENST00000502804 216 ntBASIC22.24■■□□□ 1.15
COL23A1Q86Y22 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
COL23A1Q86Y22 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC22.24■■□□□ 1.15
COL23A1Q86Y22 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC22.24■■□□□ 1.15
COL23A1Q86Y22 CYB561-216ENST00000582297 897 ntTSL 3 BASIC22.24■■□□□ 1.15
COL23A1Q86Y22 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC22.24■■□□□ 1.15
COL23A1Q86Y22 AC009093.7-201ENST00000623853 1223 ntBASIC22.24■■□□□ 1.15
COL23A1Q86Y22 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC22.24■■□□□ 1.15
COL23A1Q86Y22 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL23A1Q86Y22 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL23A1Q86Y22 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL23A1Q86Y22 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL23A1Q86Y22 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
COL23A1Q86Y22 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 OARD1-208ENST00000469104 704 ntTSL 2 BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 AC067863.1-201ENST00000494933 530 ntBASIC22.23■■□□□ 1.15
COL23A1Q86Y22 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 IGHV3OR16-6-201ENST00000568775 360 ntBASIC22.23■■□□□ 1.15
COL23A1Q86Y22 AC019129.2-201ENST00000609837 1235 ntBASIC22.23■■□□□ 1.15
COL23A1Q86Y22 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC22.23■■□□□ 1.15
COL23A1Q86Y22 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 AC097637.2-201ENST00000624096 1997 ntBASIC22.22■■□□□ 1.15
COL23A1Q86Y22 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 AC055876.3-201ENST00000431496 288 ntBASIC22.22■■□□□ 1.15
COL23A1Q86Y22 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 AC138649.4-201ENST00000612222 287 ntBASIC22.22■■□□□ 1.15
COL23A1Q86Y22 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL23A1Q86Y22 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 AC007274.1-201ENST00000439805 662 ntBASIC22.21■■□□□ 1.15
COL23A1Q86Y22 UGT1A2P-201ENST00000454886 866 ntBASIC22.21■■□□□ 1.15
COL23A1Q86Y22 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 TERF1P3-201ENST00000505638 1227 ntBASIC22.21■■□□□ 1.15
COL23A1Q86Y22 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 VPS29-207ENST00000549970 818 ntTSL 3 BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms