Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 PHGDH-209ENST00000641074 1780 ntBASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 AGGF1P2-201ENST00000426656 2106 ntBASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 NEK4P2-201ENST00000580004 1012 ntBASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 AC073508.3-201ENST00000619697 1419 ntBASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 AC105020.1-201ENST00000435356 2205 ntBASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RNF111Q6ZNA4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 RCN1P1-201ENST00000400413 996 ntBASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 MYLKP1-201ENST00000509077 1580 ntBASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 AC034236.2-201ENST00000606662 1610 ntBASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
RNF111Q6ZNA4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF111Q6ZNA4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF111Q6ZNA4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF111Q6ZNA4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF111Q6ZNA4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF111Q6ZNA4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF111Q6ZNA4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RNF111Q6ZNA4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms