Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 PCDHB17P-201ENST00000539533 2393 ntBASIC17.24■□□□□ 0.35
RNF220Q5VTB9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 AL158047.1-201ENST00000445918 881 ntBASIC17.24■□□□□ 0.35
RNF220Q5VTB9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 AC233702.5-201ENST00000584107 538 ntBASIC17.24■□□□□ 0.35
RNF220Q5VTB9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 RCC2P3-201ENST00000418112 1537 ntBASIC17.24■□□□□ 0.35
RNF220Q5VTB9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF220Q5VTB9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 AC132872.4-202ENST00000622924 2756 ntBASIC17.23■□□□□ 0.35
RNF220Q5VTB9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 ABHD17AP1-201ENST00000358206 933 ntBASIC17.23■□□□□ 0.35
RNF220Q5VTB9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 AL357033.4-201ENST00000617703 1807 ntBASIC17.23■□□□□ 0.35
RNF220Q5VTB9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF220Q5VTB9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 KRT8P45-201ENST00000414328 1447 ntBASIC17.22■□□□□ 0.35
RNF220Q5VTB9 AC112777.1-201ENST00000540175 1423 ntBASIC17.22■□□□□ 0.35
RNF220Q5VTB9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 AC023824.1-201ENST00000562945 2975 ntBASIC17.22■□□□□ 0.35
RNF220Q5VTB9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 AC113410.3-201ENST00000623366 203 ntBASIC17.22■□□□□ 0.35
RNF220Q5VTB9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 AL049637.2-201ENST00000641778 930 ntBASIC17.22■□□□□ 0.35
RNF220Q5VTB9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 AL109659.2-201ENST00000606809 1674 ntBASIC17.22■□□□□ 0.35
RNF220Q5VTB9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms