Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 RARRES2P8-201ENST00000566335 367 ntBASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 AC008738.7-201ENST00000609744 511 ntBASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 ACTL9-202ENST00000612068 1252 ntBASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 AC140658.5-201ENST00000438532 169 ntBASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 AC108725.1-201ENST00000495472 409 ntBASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 AC104989.1-201ENST00000519711 778 ntBASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 AL021578.1-201ENST00000613646 709 ntBASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL13A1Q5TAT6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL13A1Q5TAT6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL13A1Q5TAT6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL13A1Q5TAT6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL13A1Q5TAT6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL13A1Q5TAT6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL13A1Q5TAT6 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.83■□□□□ 0.77
COL13A1Q5TAT6 GNAQP1-201ENST00000444815 1067 ntBASIC19.83■□□□□ 0.77
COL13A1Q5TAT6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.83■□□□□ 0.77
COL13A1Q5TAT6 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.83■□□□□ 0.77
COL13A1Q5TAT6 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.83■□□□□ 0.77
COL13A1Q5TAT6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.83■□□□□ 0.77
COL13A1Q5TAT6 CHCHD2P3-201ENST00000603038 451 ntBASIC19.83■□□□□ 0.77
COL13A1Q5TAT6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.83■□□□□ 0.77
COL13A1Q5TAT6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL13A1Q5TAT6 AL024508.2-201ENST00000607749 1894 ntBASIC19.83■□□□□ 0.76
COL13A1Q5TAT6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
COL13A1Q5TAT6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL13A1Q5TAT6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
COL13A1Q5TAT6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
COL13A1Q5TAT6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.83■□□□□ 0.76
COL13A1Q5TAT6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
COL13A1Q5TAT6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
COL13A1Q5TAT6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 AC009477.1-201ENST00000452936 217 ntBASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 CROCCP4-201ENST00000457096 498 ntBASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 AC009407.1-201ENST00000568958 598 ntBASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 AC010460.3-201ENST00000511359 1579 ntBASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL13A1Q5TAT6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 SLC25A24P2-201ENST00000415059 510 ntBASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms