Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 AC128676.1-201ENST00000454392 318 ntBASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 AC090192.1-201ENST00000517740 490 ntBASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 CR769767.2-201ENST00000622735 460 ntBASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 LINC01451-201ENST00000623792 534 ntBASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 AC112497.1-201ENST00000624824 639 ntBASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 CRYGFP-201ENST00000418459 633 ntBASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 NUDT16P1-203ENST00000513809 620 ntBASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 AC116407.2-201ENST00000613639 860 ntBASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
LINC00242Q5T6M2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00242Q5T6M2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.21□□□□□ -0.46
LINC00242Q5T6M2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00242Q5T6M2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.21□□□□□ -0.46
LINC00242Q5T6M2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00242Q5T6M2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00242Q5T6M2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
LINC00242Q5T6M2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00242Q5T6M2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00242Q5T6M2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
LINC00242Q5T6M2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00242Q5T6M2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00242Q5T6M2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 AL135905.2-201ENST00000584934 1404 ntBASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms