Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC144BQ3MJ40 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC144BQ3MJ40 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC144BQ3MJ40 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC144BQ3MJ40 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC144BQ3MJ40 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 TSPY12P-201ENST00000421279 868 ntBASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 AF238378.1-201ENST00000526806 358 ntBASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 AC004263.2-201ENST00000617183 678 ntBASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 MTMR9LP-203ENST00000426597 1545 ntBASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC144BQ3MJ40 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.7■□□□□ 0.91
CCDC144BQ3MJ40 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 AL163051.1-201ENST00000569214 1512 ntBASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC144BQ3MJ40 PCDHA12-202ENST00000613593 2588 ntBASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 AC023511.2-201ENST00000618803 211 ntBASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC144BQ3MJ40 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms