Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN20P56880 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLDN20P56880 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN20P56880 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CLDN20P56880 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
CLDN20P56880 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN20P56880 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN20P56880 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN20P56880 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN20P56880 KRT8P26-201ENST00000534154 1276 ntBASIC16.38■□□□□ 0.21
CLDN20P56880 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN20P56880 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN20P56880 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN20P56880 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN20P56880 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 AL121672.3-201ENST00000608644 468 ntBASIC16.38■□□□□ 0.21
CLDN20P56880 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN20P56880 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CLDN20P56880 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN20P56880 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN20P56880 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN20P56880 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN20P56880 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN20P56880 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN20P56880 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLDN20P56880 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLDN20P56880 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN20P56880 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN20P56880 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLDN20P56880 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN20P56880 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN20P56880 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN20P56880 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN20P56880 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN20P56880 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN20P56880 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLDN20P56880 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN20P56880 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLDN20P56880 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN20P56880 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN20P56880 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN20P56880 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN20P56880 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLDN20P56880 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.36■□□□□ 0.21
CLDN20P56880 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN20P56880 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN20P56880 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLDN20P56880 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CLDN20P56880 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN20P56880 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CLDN20P56880 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CLDN20P56880 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN20P56880 TSSC2-201ENST00000450217 709 ntBASIC16.36■□□□□ 0.21
CLDN20P56880 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN20P56880 AC004263.2-201ENST00000617183 678 ntBASIC16.36■□□□□ 0.21
CLDN20P56880 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDN20P56880 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN20P56880 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN20P56880 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN20P56880 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLDN20P56880 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN20P56880 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN20P56880 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN20P56880 AL353692.3-201ENST00000407031 1396 ntBASIC16.36■□□□□ 0.21
CLDN20P56880 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN20P56880 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN20P56880 AC080080.1-201ENST00000625121 2420 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms