Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXG1P55316 AL133373.2-201ENST00000623187 2828 ntBASIC15.64■□□□□ 0.09
FOXG1P55316 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXG1P55316 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.64■□□□□ 0.09
FOXG1P55316 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXG1P55316 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXG1P55316 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXG1P55316 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXG1P55316 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.64■□□□□ 0.09
FOXG1P55316 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXG1P55316 MIR5100-201ENST00000579544 119 ntBASIC15.64■□□□□ 0.09
FOXG1P55316 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXG1P55316 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.64■□□□□ 0.09
FOXG1P55316 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXG1P55316 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXG1P55316 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXG1P55316 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
FOXG1P55316 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXG1P55316 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXG1P55316 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXG1P55316 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
FOXG1P55316 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXG1P55316 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXG1P55316 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.63■□□□□ 0.09
FOXG1P55316 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.63■□□□□ 0.09
FOXG1P55316 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
FOXG1P55316 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.63■□□□□ 0.09
FOXG1P55316 INTS4P1-201ENST00000438455 1935 ntBASIC15.63■□□□□ 0.09
FOXG1P55316 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
FOXG1P55316 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
FOXG1P55316 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
FOXG1P55316 POM121L3P-201ENST00000419331 1163 ntBASIC15.63■□□□□ 0.09
FOXG1P55316 AC096633.1-201ENST00000422446 749 ntBASIC15.63■□□□□ 0.09
FOXG1P55316 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.63■□□□□ 0.09
FOXG1P55316 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.63■□□□□ 0.09
FOXG1P55316 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.63■□□□□ 0.09
FOXG1P55316 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.63■□□□□ 0.09
FOXG1P55316 AC009533.2-201ENST00000543664 586 ntBASIC15.63■□□□□ 0.09
FOXG1P55316 AC011467.2-201ENST00000598425 242 ntBASIC15.63■□□□□ 0.09
FOXG1P55316 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 AC114341.1-201ENST00000618070 349 ntBASIC15.63■□□□□ 0.09
FOXG1P55316 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.63■□□□□ 0.09
FOXG1P55316 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
FOXG1P55316 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
FOXG1P55316 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
FOXG1P55316 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.63■□□□□ 0.09
FOXG1P55316 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
FOXG1P55316 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXG1P55316 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.63■□□□□ 0.09
FOXG1P55316 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
FOXG1P55316 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXG1P55316 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXG1P55316 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXG1P55316 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXG1P55316 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXG1P55316 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXG1P55316 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXG1P55316 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
FOXG1P55316 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXG1P55316 AKR1C7P-201ENST00000305623 895 ntBASIC15.62■□□□□ 0.09
FOXG1P55316 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXG1P55316 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXG1P55316 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXG1P55316 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.62■□□□□ 0.09
FOXG1P55316 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.62■□□□□ 0.09
FOXG1P55316 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.62■□□□□ 0.09
FOXG1P55316 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXG1P55316 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXG1P55316 EMBP1-201ENST00000458200 901 ntBASIC15.62■□□□□ 0.09
FOXG1P55316 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXG1P55316 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXG1P55316 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.62■□□□□ 0.09
FOXG1P55316 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.62■□□□□ 0.09
FOXG1P55316 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.62■□□□□ 0.09
FOXG1P55316 AL591684.3-201ENST00000605187 298 ntBASIC15.62■□□□□ 0.09
FOXG1P55316 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXG1P55316 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXG1P55316 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXG1P55316 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXG1P55316 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXG1P55316 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXG1P55316 AC097374.2-201ENST00000618617 1306 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms