Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AP000344.2-201ENST00000512987 629 ntBASIC19.6■□□□□ 0.73
ATN1P54259 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.6■□□□□ 0.73
ATN1P54259 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
ATN1P54259 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.6■□□□□ 0.73
ATN1P54259 AC010326.4-201ENST00000604665 891 ntBASIC19.6■□□□□ 0.73
ATN1P54259 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.6■□□□□ 0.73
ATN1P54259 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ATN1P54259 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.6■□□□□ 0.73
ATN1P54259 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ATN1P54259 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.6■□□□□ 0.73
ATN1P54259 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATN1P54259 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ATN1P54259 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 NCF1C-201ENST00000438382 1427 ntBASIC19.59■□□□□ 0.73
ATN1P54259 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ATN1P54259 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ATN1P54259 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ATN1P54259 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.59■□□□□ 0.73
ATN1P54259 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.59■□□□□ 0.73
ATN1P54259 AC103564.2-201ENST00000432853 1299 ntBASIC19.59■□□□□ 0.73
ATN1P54259 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.59■□□□□ 0.73
ATN1P54259 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 KRT19P2-202ENST00000557173 1012 ntBASIC19.59■□□□□ 0.73
ATN1P54259 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.59■□□□□ 0.73
ATN1P54259 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATN1P54259 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.59■□□□□ 0.73
ATN1P54259 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.58■□□□□ 0.73
ATN1P54259 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.58■□□□□ 0.73
ATN1P54259 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
ATN1P54259 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
ATN1P54259 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
ATN1P54259 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATN1P54259 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATN1P54259 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.58■□□□□ 0.73
ATN1P54259 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.58■□□□□ 0.73
ATN1P54259 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATN1P54259 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATN1P54259 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATN1P54259 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATN1P54259 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.58■□□□□ 0.72
ATN1P54259 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATN1P54259 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATN1P54259 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.58■□□□□ 0.72
ATN1P54259 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.58■□□□□ 0.72
ATN1P54259 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATN1P54259 AC091917.2-201ENST00000505002 744 ntBASIC19.58■□□□□ 0.72
ATN1P54259 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.58■□□□□ 0.72
ATN1P54259 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.58■□□□□ 0.72
ATN1P54259 AC138761.1-201ENST00000584393 385 ntBASIC19.58■□□□□ 0.72
ATN1P54259 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ATN1P54259 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
ATN1P54259 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.58■□□□□ 0.72
ATN1P54259 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.58■□□□□ 0.72
ATN1P54259 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
ATN1P54259 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ATN1P54259 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
ATN1P54259 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
ATN1P54259 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.58■□□□□ 0.72
ATN1P54259 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATN1P54259 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATN1P54259 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATN1P54259 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATN1P54259 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATN1P54259 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.58■□□□□ 0.72
ATN1P54259 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.57■□□□□ 0.72
ATN1P54259 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATN1P54259 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATN1P54259 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.57■□□□□ 0.72
ATN1P54259 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATN1P54259 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.57■□□□□ 0.72
ATN1P54259 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATN1P54259 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATN1P54259 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.57■□□□□ 0.72
ATN1P54259 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATN1P54259 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATN1P54259 ARL4AP4-201ENST00000434170 518 ntBASIC19.57■□□□□ 0.72
ATN1P54259 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.57■□□□□ 0.72
ATN1P54259 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.57■□□□□ 0.72
ATN1P54259 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.57■□□□□ 0.72
ATN1P54259 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.57■□□□□ 0.72
ATN1P54259 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
ATN1P54259 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ATN1P54259 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms