Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF144AP50876 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF144AP50876 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF144AP50876 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF144AP50876 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF144AP50876 AC004263.2-201ENST00000617183 678 ntBASIC16.62■□□□□ 0.25
RNF144AP50876 HYMAI.1-201ENST00000620949 238 ntBASIC16.62■□□□□ 0.25
RNF144AP50876 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF144AP50876 PRORSD1P-202ENST00000563365 2154 ntBASIC16.62■□□□□ 0.25
RNF144AP50876 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF144AP50876 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF144AP50876 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF144AP50876 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
RNF144AP50876 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF144AP50876 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF144AP50876 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF144AP50876 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF144AP50876 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF144AP50876 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF144AP50876 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF144AP50876 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF144AP50876 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF144AP50876 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF144AP50876 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RNF144AP50876 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 AC012313.1-201ENST00000593393 3059 ntBASIC16.61■□□□□ 0.25
RNF144AP50876 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF144AP50876 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 AC063952.2-201ENST00000498792 1227 ntBASIC16.61■□□□□ 0.25
RNF144AP50876 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF144AP50876 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF144AP50876 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.61■□□□□ 0.25
RNF144AP50876 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF144AP50876 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF144AP50876 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF144AP50876 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF144AP50876 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RNF144AP50876 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF144AP50876 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF144AP50876 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RNF144AP50876 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
RNF144AP50876 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF144AP50876 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF144AP50876 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF144AP50876 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF144AP50876 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.6■□□□□ 0.25
RNF144AP50876 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
RNF144AP50876 HBZP1-201ENST00000354915 429 ntBASIC16.6■□□□□ 0.25
RNF144AP50876 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RNF144AP50876 HLA-F-220ENST00000434407 884 ntBASIC16.6■□□□□ 0.25
RNF144AP50876 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 SPDYE13P-201ENST00000445314 798 ntBASIC16.6■□□□□ 0.25
RNF144AP50876 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 ZNF444P1-201ENST00000559497 298 ntBASIC16.6■□□□□ 0.25
RNF144AP50876 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF144AP50876 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms