Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AL365209.1-201ENST00000624418 6473 ntBASIC13.17□□□□□ -0.3
CKS2P33552 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.17□□□□□ -0.3
CKS2P33552 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
CKS2P33552 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.16□□□□□ -0.3
CKS2P33552 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CKS2P33552 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CKS2P33552 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
CKS2P33552 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.16□□□□□ -0.3
CKS2P33552 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CKS2P33552 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.16□□□□□ -0.3
CKS2P33552 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CKS2P33552 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CKS2P33552 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.16□□□□□ -0.3
CKS2P33552 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.16□□□□□ -0.3
CKS2P33552 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.16□□□□□ -0.3
CKS2P33552 PNMA6B-201ENST00000538162 1200 ntBASIC13.16□□□□□ -0.3
CKS2P33552 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CKS2P33552 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.16□□□□□ -0.3
CKS2P33552 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 PCDH8P1-201ENST00000428983 2773 ntBASIC13.16□□□□□ -0.3
CKS2P33552 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.16□□□□□ -0.3
CKS2P33552 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.16□□□□□ -0.3
CKS2P33552 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CKS2P33552 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.16□□□□□ -0.3
CKS2P33552 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 NBPF21P-201ENST00000425093 1451 ntBASIC13.16□□□□□ -0.3
CKS2P33552 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.16□□□□□ -0.3
CKS2P33552 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.16□□□□□ -0.3
CKS2P33552 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CKS2P33552 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CKS2P33552 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.15□□□□□ -0.3
CKS2P33552 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.15□□□□□ -0.3
CKS2P33552 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
CKS2P33552 PCDHA14-201ENST00000506751 2298 ntBASIC13.15□□□□□ -0.3
CKS2P33552 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.15□□□□□ -0.3
CKS2P33552 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CKS2P33552 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.15□□□□□ -0.3
CKS2P33552 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CKS2P33552 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 CICP6-201ENST00000457191 2729 ntBASIC13.15□□□□□ -0.3
CKS2P33552 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CKS2P33552 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CKS2P33552 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
CKS2P33552 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.15□□□□□ -0.3
CKS2P33552 AC093010.1-201ENST00000473625 1624 ntBASIC13.15□□□□□ -0.3
CKS2P33552 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.15□□□□□ -0.3
CKS2P33552 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.15□□□□□ -0.3
CKS2P33552 AC091874.3-201ENST00000512672 1195 ntBASIC13.15□□□□□ -0.3
CKS2P33552 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.15□□□□□ -0.3
CKS2P33552 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.15□□□□□ -0.3
CKS2P33552 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CKS2P33552 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 AC008687.6-201ENST00000596318 630 ntBASIC13.15□□□□□ -0.3
CKS2P33552 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CKS2P33552 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
CKS2P33552 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
CKS2P33552 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CKS2P33552 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms