Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 HYMAI.1-201ENST00000620949 238 ntBASIC18.84■□□□□ 0.61
CHRNA3P32297 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CHRNA3P32297 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHRNA3P32297 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.84■□□□□ 0.61
CHRNA3P32297 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CHRNA3P32297 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHRNA3P32297 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHRNA3P32297 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CHRNA3P32297 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.83■□□□□ 0.61
CHRNA3P32297 AL023806.1-201ENST00000603994 1649 ntBASIC18.83■□□□□ 0.61
CHRNA3P32297 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA3P32297 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.83■□□□□ 0.6
CHRNA3P32297 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.83■□□□□ 0.6
CHRNA3P32297 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.83■□□□□ 0.6
CHRNA3P32297 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.83■□□□□ 0.6
CHRNA3P32297 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.83■□□□□ 0.6
CHRNA3P32297 AC009065.1-201ENST00000564055 1225 ntBASIC18.83■□□□□ 0.6
CHRNA3P32297 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.83■□□□□ 0.6
CHRNA3P32297 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA3P32297 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA3P32297 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA3P32297 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA3P32297 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA3P32297 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA3P32297 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA3P32297 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.83■□□□□ 0.6
CHRNA3P32297 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CHRNA3P32297 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.83■□□□□ 0.6
CHRNA3P32297 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.83■□□□□ 0.6
CHRNA3P32297 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.83■□□□□ 0.6
CHRNA3P32297 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA3P32297 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA3P32297 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.83■□□□□ 0.6
CHRNA3P32297 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CHRNA3P32297 LINC01311-201ENST00000565162 1445 ntBASIC18.83■□□□□ 0.6
CHRNA3P32297 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA3P32297 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA3P32297 AC080080.1-201ENST00000625121 2420 ntBASIC18.82■□□□□ 0.6
CHRNA3P32297 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA3P32297 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA3P32297 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA3P32297 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA3P32297 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA3P32297 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHRNA3P32297 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA3P32297 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA3P32297 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.82■□□□□ 0.6
CHRNA3P32297 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.82■□□□□ 0.6
CHRNA3P32297 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
CHRNA3P32297 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA3P32297 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA3P32297 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA3P32297 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA3P32297 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CHRNA3P32297 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA3P32297 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRNA3P32297 PCDHA12-202ENST00000613593 2588 ntBASIC18.82■□□□□ 0.6
CHRNA3P32297 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CHRNA3P32297 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CHRNA3P32297 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.81■□□□□ 0.6
CHRNA3P32297 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 PCED1CP-201ENST00000419887 785 ntBASIC18.81■□□□□ 0.6
CHRNA3P32297 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRNA3P32297 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.81■□□□□ 0.6
CHRNA3P32297 ZNF444P1-201ENST00000559497 298 ntBASIC18.81■□□□□ 0.6
CHRNA3P32297 AC083849.1-201ENST00000615227 514 ntBASIC18.81■□□□□ 0.6
CHRNA3P32297 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CHRNA3P32297 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHRNA3P32297 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHRNA3P32297 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA3P32297 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHRNA3P32297 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms