Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 AL845331.1-201ENST00000424978 1190 ntBASIC21.51■■□□□ 1.03
CHMLP26374 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CHMLP26374 NTF6B-201ENST00000591913 560 ntBASIC21.51■■□□□ 1.03
CHMLP26374 AC011498.5-201ENST00000592027 486 ntBASIC21.51■■□□□ 1.03
CHMLP26374 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHMLP26374 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.51■■□□□ 1.03
CHMLP26374 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.51■■□□□ 1.03
CHMLP26374 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMLP26374 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMLP26374 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.51■■□□□ 1.03
CHMLP26374 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.51■■□□□ 1.03
CHMLP26374 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMLP26374 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMLP26374 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHMLP26374 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMLP26374 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.51■■□□□ 1.03
CHMLP26374 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMLP26374 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.51■■□□□ 1.03
CHMLP26374 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CHMLP26374 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHMLP26374 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.5■■□□□ 1.03
CHMLP26374 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
CHMLP26374 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.5■■□□□ 1.03
CHMLP26374 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMLP26374 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.5■■□□□ 1.03
CHMLP26374 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CHMLP26374 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CHMLP26374 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHMLP26374 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.5■■□□□ 1.03
CHMLP26374 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CHMLP26374 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.5■■□□□ 1.03
CHMLP26374 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMLP26374 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.5■■□□□ 1.03
CHMLP26374 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CHMLP26374 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.5■■□□□ 1.03
CHMLP26374 AL049597.2-201ENST00000565575 961 ntBASIC21.5■■□□□ 1.03
CHMLP26374 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.5■■□□□ 1.03
CHMLP26374 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.5■■□□□ 1.03
CHMLP26374 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMLP26374 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHMLP26374 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMLP26374 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMLP26374 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CHMLP26374 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMLP26374 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMLP26374 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.5■■□□□ 1.03
CHMLP26374 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CHMLP26374 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMLP26374 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.49■■□□□ 1.03
CHMLP26374 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.49■■□□□ 1.03
CHMLP26374 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMLP26374 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMLP26374 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMLP26374 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMLP26374 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.49■■□□□ 1.03
CHMLP26374 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.49■■□□□ 1.03
CHMLP26374 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CHMLP26374 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMLP26374 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.49■■□□□ 1.03
CHMLP26374 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMLP26374 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.49■■□□□ 1.03
CHMLP26374 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMLP26374 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.49■■□□□ 1.03
CHMLP26374 FAM86EP-206ENST00000510506 987 ntBASIC21.49■■□□□ 1.03
CHMLP26374 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMLP26374 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.49■■□□□ 1.03
CHMLP26374 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
CHMLP26374 AL353801.3-201ENST00000609898 542 ntBASIC21.49■■□□□ 1.03
CHMLP26374 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.49■■□□□ 1.03
CHMLP26374 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.49■■□□□ 1.03
CHMLP26374 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.49■■□□□ 1.03
CHMLP26374 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CHMLP26374 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMLP26374 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMLP26374 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.49■■□□□ 1.03
CHMLP26374 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMLP26374 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMLP26374 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.48■■□□□ 1.03
CHMLP26374 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMLP26374 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CHMLP26374 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMLP26374 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMLP26374 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMLP26374 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.48■■□□□ 1.03
CHMLP26374 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMLP26374 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMLP26374 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CHMLP26374 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.48■■□□□ 1.03
CHMLP26374 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CHMLP26374 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.48■■□□□ 1.03
CHMLP26374 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.48■■□□□ 1.03
CHMLP26374 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMLP26374 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.48■■□□□ 1.03
CHMLP26374 AL121956.5-201ENST00000625261 221 ntBASIC21.48■■□□□ 1.03
CHMLP26374 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.48■■□□□ 1.03
CHMLP26374 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMLP26374 AC005332.1-201ENST00000577698 1310 ntBASIC21.48■■□□□ 1.03
CHMLP26374 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMLP26374 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMLP26374 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms