Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
MMP11P24347 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.96■□□□□ 0.3
MMP11P24347 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP11P24347 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.95■□□□□ 0.3
MMP11P24347 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.95■□□□□ 0.3
MMP11P24347 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP11P24347 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.95■□□□□ 0.3
MMP11P24347 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP11P24347 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP11P24347 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MMP11P24347 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MMP11P24347 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP11P24347 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP11P24347 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
MMP11P24347 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MMP11P24347 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.95■□□□□ 0.3
MMP11P24347 POM121L3P-201ENST00000419331 1163 ntBASIC16.95■□□□□ 0.3
MMP11P24347 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.95■□□□□ 0.3
MMP11P24347 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.95■□□□□ 0.3
MMP11P24347 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.95■□□□□ 0.3
MMP11P24347 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.95■□□□□ 0.3
MMP11P24347 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.95■□□□□ 0.3
MMP11P24347 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP11P24347 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.95■□□□□ 0.3
MMP11P24347 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP11P24347 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MMP11P24347 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MMP11P24347 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
MMP11P24347 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP11P24347 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP11P24347 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
MMP11P24347 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MMP11P24347 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP11P24347 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP11P24347 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP11P24347 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.94■□□□□ 0.3
MMP11P24347 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP11P24347 AC009154.2-201ENST00000621177 724 ntBASIC16.94■□□□□ 0.3
MMP11P24347 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP11P24347 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP11P24347 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP11P24347 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP11P24347 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
MMP11P24347 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP11P24347 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP11P24347 AC138028.4-201ENST00000564984 1845 ntBASIC16.93■□□□□ 0.3
MMP11P24347 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
MMP11P24347 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP11P24347 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP11P24347 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP11P24347 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP11P24347 AC134043.2-201ENST00000624206 2238 ntBASIC16.93■□□□□ 0.3
MMP11P24347 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
MMP11P24347 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP11P24347 AC138932.1-201ENST00000534164 6830 ntBASIC16.93■□□□□ 0.3
MMP11P24347 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP11P24347 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP11P24347 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP11P24347 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP11P24347 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP11P24347 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
MMP11P24347 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP11P24347 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP11P24347 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
MMP11P24347 FDX1P1-201ENST00000449115 551 ntBASIC16.93■□□□□ 0.3
MMP11P24347 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP11P24347 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.93■□□□□ 0.3
MMP11P24347 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.93■□□□□ 0.3
MMP11P24347 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.93■□□□□ 0.3
MMP11P24347 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP11P24347 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MMP11P24347 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.93■□□□□ 0.3
MMP11P24347 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MMP11P24347 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP11P24347 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.93■□□□□ 0.3
MMP11P24347 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP11P24347 KRT8P10-201ENST00000450021 1447 ntBASIC16.93■□□□□ 0.3
MMP11P24347 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MMP11P24347 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
MMP11P24347 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms