Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
KRT3P12035 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT3P12035 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
KRT3P12035 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT3P12035 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT3P12035 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT3P12035 AL645929.1-201ENST00000420084 975 ntBASIC18.83■□□□□ 0.6
KRT3P12035 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KRT3P12035 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KRT3P12035 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.83■□□□□ 0.6
KRT3P12035 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KRT3P12035 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.83■□□□□ 0.6
KRT3P12035 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.83■□□□□ 0.6
KRT3P12035 AC116407.2-201ENST00000613639 860 ntBASIC18.83■□□□□ 0.6
KRT3P12035 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.83■□□□□ 0.6
KRT3P12035 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KRT3P12035 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KRT3P12035 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KRT3P12035 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
KRT3P12035 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KRT3P12035 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT3P12035 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT3P12035 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.83■□□□□ 0.6
KRT3P12035 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT3P12035 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
KRT3P12035 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
KRT3P12035 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT3P12035 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
KRT3P12035 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KRT3P12035 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT3P12035 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT3P12035 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT3P12035 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KRT3P12035 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT3P12035 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KRT3P12035 LINC00896-202ENST00000609602 2128 ntBASIC18.82■□□□□ 0.6
KRT3P12035 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
KRT3P12035 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT3P12035 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT3P12035 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
KRT3P12035 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT3P12035 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.82■□□□□ 0.6
KRT3P12035 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.82■□□□□ 0.6
KRT3P12035 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
KRT3P12035 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT3P12035 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KRT3P12035 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT3P12035 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.82■□□□□ 0.6
KRT3P12035 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
KRT3P12035 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT3P12035 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT3P12035 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT3P12035 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT3P12035 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT3P12035 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT3P12035 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.82■□□□□ 0.6
KRT3P12035 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.82■□□□□ 0.6
KRT3P12035 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT3P12035 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT3P12035 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT3P12035 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRT3P12035 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT3P12035 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
KRT3P12035 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT3P12035 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT3P12035 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.81■□□□□ 0.6
KRT3P12035 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KRT3P12035 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT3P12035 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT3P12035 AL031133.1-201ENST00000406807 723 ntBASIC18.81■□□□□ 0.6
KRT3P12035 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.81■□□□□ 0.6
KRT3P12035 AC112698.1-201ENST00000510299 916 ntBASIC18.81■□□□□ 0.6
KRT3P12035 AL136038.3-201ENST00000561909 1096 ntBASIC18.81■□□□□ 0.6
KRT3P12035 NTF6B-201ENST00000591913 560 ntBASIC18.81■□□□□ 0.6
KRT3P12035 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.81■□□□□ 0.6
KRT3P12035 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.81■□□□□ 0.6
KRT3P12035 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
KRT3P12035 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.81■□□□□ 0.6
KRT3P12035 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.81■□□□□ 0.6
KRT3P12035 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.81■□□□□ 0.6
KRT3P12035 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT3P12035 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRT3P12035 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KRT3P12035 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT3P12035 LETM1P2-201ENST00000597330 2178 ntBASIC18.81■□□□□ 0.6
KRT3P12035 KRT8P47-201ENST00000604727 1398 ntBASIC18.81■□□□□ 0.6
KRT3P12035 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT3P12035 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
KRT3P12035 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KRT3P12035 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT3P12035 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT3P12035 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT3P12035 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT3P12035 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT3P12035 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KRT3P12035 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.8■□□□□ 0.6
KRT3P12035 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.8■□□□□ 0.6
KRT3P12035 AC068472.1-201ENST00000474589 881 ntBASIC18.8■□□□□ 0.6
KRT3P12035 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.8■□□□□ 0.6
KRT3P12035 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms