Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.69■□□□□ 0.1
UBCP0CG48 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 KRT17P2-201ENST00000300992 1314 ntBASIC15.68■□□□□ 0.1
UBCP0CG48 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
UBCP0CG48 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
UBCP0CG48 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.68■□□□□ 0.1
UBCP0CG48 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.68■□□□□ 0.1
UBCP0CG48 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.68■□□□□ 0.1
UBCP0CG48 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.68■□□□□ 0.1
UBCP0CG48 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
UBCP0CG48 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.68■□□□□ 0.1
UBCP0CG48 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.68■□□□□ 0.1
UBCP0CG48 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
UBCP0CG48 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
UBCP0CG48 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.68■□□□□ 0.1
UBCP0CG48 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.68■□□□□ 0.1
UBCP0CG48 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.68■□□□□ 0.1
UBCP0CG48 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.68■□□□□ 0.1
UBCP0CG48 NEK4P2-201ENST00000580004 1012 ntBASIC15.68■□□□□ 0.1
UBCP0CG48 AC116407.2-201ENST00000613639 860 ntBASIC15.68■□□□□ 0.1
UBCP0CG48 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.68■□□□□ 0.1
UBCP0CG48 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
UBCP0CG48 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.68■□□□□ 0.1
UBCP0CG48 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.68■□□□□ 0.1
UBCP0CG48 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.68■□□□□ 0.1
UBCP0CG48 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.68■□□□□ 0.1
UBCP0CG48 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
UBCP0CG48 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
UBCP0CG48 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
UBCP0CG48 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.68■□□□□ 0.1
UBCP0CG48 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
UBCP0CG48 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.68■□□□□ 0.1
UBCP0CG48 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBCP0CG48 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.67■□□□□ 0.1
UBCP0CG48 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
UBCP0CG48 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.67■□□□□ 0.1
UBCP0CG48 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 PP12613-201ENST00000424958 2230 ntBASIC15.67■□□□□ 0.1
UBCP0CG48 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.67■□□□□ 0.1
UBCP0CG48 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
UBCP0CG48 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.67■□□□□ 0.1
UBCP0CG48 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
UBCP0CG48 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.67■□□□□ 0.1
UBCP0CG48 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.67■□□□□ 0.1
UBCP0CG48 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.67■□□□□ 0.1
UBCP0CG48 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.67■□□□□ 0.1
UBCP0CG48 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.67■□□□□ 0.1
UBCP0CG48 AC009947.2-201ENST00000444014 672 ntBASIC15.67■□□□□ 0.1
UBCP0CG48 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.67■□□□□ 0.1
UBCP0CG48 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.67■□□□□ 0.1
UBCP0CG48 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.67■□□□□ 0.1
UBCP0CG48 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
UBCP0CG48 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.67■□□□□ 0.1
UBCP0CG48 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
UBCP0CG48 AC024243.1-201ENST00000609234 778 ntBASIC15.67■□□□□ 0.1
UBCP0CG48 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
UBCP0CG48 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 AC108860.2-201ENST00000562760 2183 ntBASIC15.67■□□□□ 0.1
UBCP0CG48 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.67■□□□□ 0.1
UBCP0CG48 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
UBCP0CG48 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
UBCP0CG48 AC100803.2-201ENST00000562459 1963 ntBASIC15.67■□□□□ 0.1
UBCP0CG48 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
UBCP0CG48 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 AC011270.2-201ENST00000624293 2550 ntBASIC15.67■□□□□ 0.1
UBCP0CG48 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
UBCP0CG48 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.67■□□□□ 0.1
UBCP0CG48 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms