Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HTR1AP08908 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.31■□□□□ 0.2
HTR1AP08908 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.31■□□□□ 0.2
HTR1AP08908 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTR1AP08908 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTR1AP08908 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HTR1AP08908 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HTR1AP08908 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
HTR1AP08908 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.31■□□□□ 0.2
HTR1AP08908 AL355802.2-201ENST00000402069 882 ntBASIC16.31■□□□□ 0.2
HTR1AP08908 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTR1AP08908 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
HTR1AP08908 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HTR1AP08908 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.31■□□□□ 0.2
HTR1AP08908 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.31■□□□□ 0.2
HTR1AP08908 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTR1AP08908 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
HTR1AP08908 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTR1AP08908 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.31■□□□□ 0.2
HTR1AP08908 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTR1AP08908 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.31■□□□□ 0.2
HTR1AP08908 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HTR1AP08908 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HTR1AP08908 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.31■□□□□ 0.2
HTR1AP08908 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.31■□□□□ 0.2
HTR1AP08908 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HTR1AP08908 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTR1AP08908 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HTR1AP08908 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HTR1AP08908 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HTR1AP08908 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.31■□□□□ 0.2
HTR1AP08908 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.3■□□□□ 0.2
HTR1AP08908 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.3■□□□□ 0.2
HTR1AP08908 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1AP08908 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1AP08908 LINC01126-201ENST00000623515 1646 ntBASIC16.3■□□□□ 0.2
HTR1AP08908 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
HTR1AP08908 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.3■□□□□ 0.2
HTR1AP08908 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1AP08908 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1AP08908 AL603756.1-201ENST00000606511 2163 ntBASIC16.3■□□□□ 0.2
HTR1AP08908 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HTR1AP08908 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1AP08908 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1AP08908 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1AP08908 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1AP08908 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HTR1AP08908 AP002982.1-201ENST00000492365 877 ntBASIC16.3■□□□□ 0.2
HTR1AP08908 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.3■□□□□ 0.2
HTR1AP08908 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.3■□□□□ 0.2
HTR1AP08908 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.3■□□□□ 0.2
HTR1AP08908 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1AP08908 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1AP08908 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.3■□□□□ 0.2
HTR1AP08908 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HTR1AP08908 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1AP08908 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1AP08908 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HTR1AP08908 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1AP08908 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1AP08908 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HTR1AP08908 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.3■□□□□ 0.2
HTR1AP08908 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTR1AP08908 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.3■□□□□ 0.2
HTR1AP08908 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.3■□□□□ 0.2
HTR1AP08908 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
HTR1AP08908 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HTR1AP08908 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.29■□□□□ 0.2
HTR1AP08908 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HTR1AP08908 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.29■□□□□ 0.2
HTR1AP08908 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.29■□□□□ 0.2
HTR1AP08908 AC110285.5-201ENST00000611501 352 ntBASIC16.29■□□□□ 0.2
HTR1AP08908 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.29■□□□□ 0.2
HTR1AP08908 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 HLA-J-201ENST00000462773 1622 ntBASIC16.29■□□□□ 0.2
HTR1AP08908 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HTR1AP08908 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.29■□□□□ 0.2
HTR1AP08908 PCDHB17P-201ENST00000539533 2393 ntBASIC16.29■□□□□ 0.2
HTR1AP08908 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HTR1AP08908 LINC00554-201ENST00000564841 3011 ntBASIC16.29■□□□□ 0.2
HTR1AP08908 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.29■□□□□ 0.2
HTR1AP08908 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTR1AP08908 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HTR1AP08908 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1AP08908 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms