Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.7■□□□□ 0.26
PDGFAP04085 MTDHP3-201ENST00000594186 672 ntBASIC16.7■□□□□ 0.26
PDGFAP04085 AP001269.4-201ENST00000609611 512 ntBASIC16.7■□□□□ 0.26
PDGFAP04085 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
PDGFAP04085 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PDGFAP04085 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.7■□□□□ 0.26
PDGFAP04085 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.7■□□□□ 0.26
PDGFAP04085 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PDGFAP04085 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.7■□□□□ 0.26
PDGFAP04085 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFAP04085 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFAP04085 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PDGFAP04085 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.69■□□□□ 0.26
PDGFAP04085 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.69■□□□□ 0.26
PDGFAP04085 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFAP04085 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PDGFAP04085 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFAP04085 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.69■□□□□ 0.26
PDGFAP04085 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFAP04085 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PDGFAP04085 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFAP04085 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFAP04085 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFAP04085 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFAP04085 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.69■□□□□ 0.26
PDGFAP04085 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.69■□□□□ 0.26
PDGFAP04085 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFAP04085 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.69■□□□□ 0.26
PDGFAP04085 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.69■□□□□ 0.26
PDGFAP04085 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.69■□□□□ 0.26
PDGFAP04085 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.69■□□□□ 0.26
PDGFAP04085 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFAP04085 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.69■□□□□ 0.26
PDGFAP04085 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.69■□□□□ 0.26
PDGFAP04085 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.69■□□□□ 0.26
PDGFAP04085 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PDGFAP04085 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.69■□□□□ 0.26
PDGFAP04085 AC093484.2-201ENST00000580996 2166 ntBASIC16.69■□□□□ 0.26
PDGFAP04085 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFAP04085 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.69■□□□□ 0.26
PDGFAP04085 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.69■□□□□ 0.26
PDGFAP04085 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.69■□□□□ 0.26
PDGFAP04085 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFAP04085 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.69■□□□□ 0.26
PDGFAP04085 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PDGFAP04085 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.69■□□□□ 0.26
PDGFAP04085 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFAP04085 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.68■□□□□ 0.26
PDGFAP04085 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PDGFAP04085 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
PDGFAP04085 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFAP04085 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PDGFAP04085 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PDGFAP04085 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.68■□□□□ 0.26
PDGFAP04085 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFAP04085 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.68■□□□□ 0.26
PDGFAP04085 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.68■□□□□ 0.26
PDGFAP04085 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFAP04085 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFAP04085 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.68■□□□□ 0.26
PDGFAP04085 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFAP04085 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PDGFAP04085 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFAP04085 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFAP04085 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFAP04085 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFAP04085 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFAP04085 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PDGFAP04085 ZNF259P1-201ENST00000407656 1365 ntBASIC16.67■□□□□ 0.26
PDGFAP04085 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.67■□□□□ 0.26
PDGFAP04085 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFAP04085 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFAP04085 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms