Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
KRT6AP02538 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
KRT6AP02538 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6AP02538 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6AP02538 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6AP02538 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.32■□□□□ 0.36
KRT6AP02538 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT6AP02538 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.32■□□□□ 0.36
KRT6AP02538 COX11P1-201ENST00000489116 835 ntBASIC17.32■□□□□ 0.36
KRT6AP02538 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6AP02538 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
KRT6AP02538 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT6AP02538 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6AP02538 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
KRT6AP02538 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
KRT6AP02538 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.32■□□□□ 0.36
KRT6AP02538 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6AP02538 AC106820.2-201ENST00000563775 3264 ntBASIC17.32■□□□□ 0.36
KRT6AP02538 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6AP02538 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6AP02538 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
KRT6AP02538 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
KRT6AP02538 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT6AP02538 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
KRT6AP02538 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT6AP02538 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT6AP02538 KRT18P65-201ENST00000439811 1286 ntBASIC17.31■□□□□ 0.36
KRT6AP02538 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT6AP02538 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT6AP02538 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT6AP02538 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT6AP02538 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT6AP02538 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT6AP02538 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT6AP02538 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT6AP02538 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT6AP02538 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT6AP02538 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT6AP02538 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6AP02538 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT6AP02538 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
KRT6AP02538 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT6AP02538 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
KRT6AP02538 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT6AP02538 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT6AP02538 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.3■□□□□ 0.36
KRT6AP02538 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.3■□□□□ 0.36
KRT6AP02538 AL136038.4-201ENST00000603606 1261 ntBASIC17.3■□□□□ 0.36
KRT6AP02538 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6AP02538 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT6AP02538 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT6AP02538 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6AP02538 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6AP02538 AL355312.1-201ENST00000407115 2176 ntBASIC17.29■□□□□ 0.36
KRT6AP02538 AL391807.1-203ENST00000604392 2365 ntBASIC17.29■□□□□ 0.36
KRT6AP02538 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6AP02538 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6AP02538 AC010203.1-204ENST00000548782 407 ntBASIC17.29■□□□□ 0.36
KRT6AP02538 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT6AP02538 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.29■□□□□ 0.36
KRT6AP02538 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6AP02538 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6AP02538 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6AP02538 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.29■□□□□ 0.36
KRT6AP02538 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT6AP02538 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT6AP02538 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms