Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GRIN3BO60391 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
GRIN3BO60391 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GRIN3BO60391 AC099343.3-201ENST00000605834 2503 ntBASIC21.61■■□□□ 1.05
GRIN3BO60391 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GRIN3BO60391 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GRIN3BO60391 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GRIN3BO60391 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GRIN3BO60391 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
GRIN3BO60391 KRT8P48-201ENST00000515599 1220 ntBASIC21.61■■□□□ 1.05
GRIN3BO60391 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.61■■□□□ 1.05
GRIN3BO60391 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GRIN3BO60391 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GRIN3BO60391 BSG-214ENST00000614867 960 ntTSL 3 BASIC21.61■■□□□ 1.05
GRIN3BO60391 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC21.61■■□□□ 1.05
GRIN3BO60391 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GRIN3BO60391 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.61■■□□□ 1.05
GRIN3BO60391 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.61■■□□□ 1.05
GRIN3BO60391 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GRIN3BO60391 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.61■■□□□ 1.05
GRIN3BO60391 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.61■■□□□ 1.05
GRIN3BO60391 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
GRIN3BO60391 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
GRIN3BO60391 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GRIN3BO60391 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.6■■□□□ 1.05
GRIN3BO60391 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GRIN3BO60391 AC148477.5-201ENST00000625164 1645 ntBASIC21.6■■□□□ 1.05
GRIN3BO60391 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
GRIN3BO60391 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GRIN3BO60391 AL355306.1-201ENST00000415580 579 ntBASIC21.6■■□□□ 1.05
GRIN3BO60391 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
GRIN3BO60391 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.6■■□□□ 1.05
GRIN3BO60391 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC21.6■■□□□ 1.05
GRIN3BO60391 U91328.1-201ENST00000437528 223 ntBASIC21.6■■□□□ 1.05
GRIN3BO60391 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
GRIN3BO60391 SERBP1P5-201ENST00000510079 1181 ntBASIC21.6■■□□□ 1.05
GRIN3BO60391 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
GRIN3BO60391 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GRIN3BO60391 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.6■■□□□ 1.05
GRIN3BO60391 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GRIN3BO60391 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.6■■□□□ 1.05
GRIN3BO60391 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.6■■□□□ 1.05
GRIN3BO60391 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GRIN3BO60391 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.59■■□□□ 1.05
GRIN3BO60391 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.59■■□□□ 1.05
GRIN3BO60391 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GRIN3BO60391 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
GRIN3BO60391 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GRIN3BO60391 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.59■■□□□ 1.05
GRIN3BO60391 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.59■■□□□ 1.05
GRIN3BO60391 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.59■■□□□ 1.05
GRIN3BO60391 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.59■■□□□ 1.05
GRIN3BO60391 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC21.59■■□□□ 1.05
GRIN3BO60391 COQ9-214ENST00000567933 882 ntTSL 3 BASIC21.59■■□□□ 1.05
GRIN3BO60391 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC21.59■■□□□ 1.05
GRIN3BO60391 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
GRIN3BO60391 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
GRIN3BO60391 AC112907.3-201ENST00000577781 2400 ntBASIC21.59■■□□□ 1.05
GRIN3BO60391 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GRIN3BO60391 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GRIN3BO60391 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
GRIN3BO60391 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GRIN3BO60391 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.58■■□□□ 1.05
GRIN3BO60391 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GRIN3BO60391 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GRIN3BO60391 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
GRIN3BO60391 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
GRIN3BO60391 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GRIN3BO60391 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
GRIN3BO60391 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GRIN3BO60391 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.58■■□□□ 1.05
GRIN3BO60391 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GRIN3BO60391 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC21.58■■□□□ 1.05
GRIN3BO60391 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC21.58■■□□□ 1.05
GRIN3BO60391 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.58■■□□□ 1.05
GRIN3BO60391 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.58■■□□□ 1.05
GRIN3BO60391 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.58■■□□□ 1.05
GRIN3BO60391 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.58■■□□□ 1.05
GRIN3BO60391 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GRIN3BO60391 NOP2-211ENST00000540228 668 ntTSL 2 BASIC21.58■■□□□ 1.05
GRIN3BO60391 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GRIN3BO60391 AC009118.2-201ENST00000613275 655 ntBASIC21.58■■□□□ 1.05
GRIN3BO60391 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
GRIN3BO60391 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.58■■□□□ 1.05
GRIN3BO60391 TCF3P1-201ENST00000423021 1937 ntBASIC21.58■■□□□ 1.04
GRIN3BO60391 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.58■■□□□ 1.04
GRIN3BO60391 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
GRIN3BO60391 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
GRIN3BO60391 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
GRIN3BO60391 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
GRIN3BO60391 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
GRIN3BO60391 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
GRIN3BO60391 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
GRIN3BO60391 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.57■■□□□ 1.04
GRIN3BO60391 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GRIN3BO60391 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
GRIN3BO60391 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
GRIN3BO60391 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GRIN3BO60391 FAM58DP-201ENST00000428076 619 ntBASIC21.57■■□□□ 1.04
GRIN3BO60391 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms