Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
COPEO14579 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.88■□□□□ 0.45
COPEO14579 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
COPEO14579 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.88■□□□□ 0.45
COPEO14579 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 AL023803.3-201ENST00000615559 522 ntBASIC17.88■□□□□ 0.45
COPEO14579 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.88■□□□□ 0.45
COPEO14579 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.88■□□□□ 0.45
COPEO14579 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.88■□□□□ 0.45
COPEO14579 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.87■□□□□ 0.45
COPEO14579 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
COPEO14579 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.87■□□□□ 0.45
COPEO14579 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.87■□□□□ 0.45
COPEO14579 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.87■□□□□ 0.45
COPEO14579 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 TSPY17P-201ENST00000450329 467 ntBASIC17.87■□□□□ 0.45
COPEO14579 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.87■□□□□ 0.45
COPEO14579 AL353719.1-201ENST00000566847 864 ntBASIC17.87■□□□□ 0.45
COPEO14579 AP005242.2-201ENST00000580065 1175 ntBASIC17.87■□□□□ 0.45
COPEO14579 MIR4651-201ENST00000582622 73 ntBASIC17.87■□□□□ 0.45
COPEO14579 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.87■□□□□ 0.45
COPEO14579 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.87■□□□□ 0.45
COPEO14579 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
COPEO14579 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
COPEO14579 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
COPEO14579 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPEO14579 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPEO14579 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
COPEO14579 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.86■□□□□ 0.45
COPEO14579 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COPEO14579 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPEO14579 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPEO14579 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COPEO14579 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COPEO14579 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
COPEO14579 SLC25A1P2-201ENST00000430693 912 ntBASIC17.86■□□□□ 0.45
COPEO14579 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
COPEO14579 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.86■□□□□ 0.45
COPEO14579 AC010240.3-201ENST00000607688 395 ntBASIC17.86■□□□□ 0.45
COPEO14579 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COPEO14579 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.86■□□□□ 0.45
COPEO14579 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPEO14579 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.86■□□□□ 0.45
COPEO14579 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.86■□□□□ 0.45
COPEO14579 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPEO14579 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.86■□□□□ 0.45
COPEO14579 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPEO14579 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COPEO14579 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.86■□□□□ 0.45
COPEO14579 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COPEO14579 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COPEO14579 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.86■□□□□ 0.45
COPEO14579 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPEO14579 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPEO14579 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPEO14579 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COPEO14579 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.85■□□□□ 0.45
COPEO14579 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPEO14579 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.85■□□□□ 0.45
COPEO14579 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.85■□□□□ 0.45
COPEO14579 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.85■□□□□ 0.45
COPEO14579 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
COPEO14579 TNRC18P3-201ENST00000441896 2691 ntBASIC17.85■□□□□ 0.45
COPEO14579 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.85■□□□□ 0.45
COPEO14579 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.85■□□□□ 0.45
COPEO14579 CD99P1-205ENST00000527459 561 ntBASIC17.85■□□□□ 0.45
COPEO14579 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
COPEO14579 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COPEO14579 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
COPEO14579 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.85■□□□□ 0.45
COPEO14579 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
COPEO14579 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPEO14579 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COPEO14579 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.85■□□□□ 0.45
COPEO14579 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPEO14579 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
COPEO14579 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPEO14579 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms