Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDN4O14493 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDN4O14493 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN4O14493 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDN4O14493 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN4O14493 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN4O14493 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN4O14493 AC104819.1-201ENST00000504587 486 ntBASIC16.83■□□□□ 0.28
CLDN4O14493 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN4O14493 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN4O14493 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN4O14493 AP000867.3-201ENST00000524675 377 ntBASIC16.83■□□□□ 0.28
CLDN4O14493 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN4O14493 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CLDN4O14493 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CLDN4O14493 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN4O14493 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN4O14493 KRT18P55-202ENST00000578578 1546 ntBASIC16.83■□□□□ 0.28
CLDN4O14493 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN4O14493 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN4O14493 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDN4O14493 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDN4O14493 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN4O14493 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN4O14493 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN4O14493 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN4O14493 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLDN4O14493 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN4O14493 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.82■□□□□ 0.28
CLDN4O14493 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN4O14493 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN4O14493 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN4O14493 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CLDN4O14493 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLDN4O14493 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN4O14493 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.82■□□□□ 0.28
CLDN4O14493 AC012615.1-201ENST00000565797 1299 ntBASIC16.82■□□□□ 0.28
CLDN4O14493 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CLDN4O14493 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN4O14493 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLDN4O14493 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN4O14493 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLDN4O14493 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CLDN4O14493 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLDN4O14493 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN4O14493 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN4O14493 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CLDN4O14493 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN4O14493 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLDN4O14493 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN4O14493 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN4O14493 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN4O14493 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLDN4O14493 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CLDN4O14493 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLDN4O14493 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CLDN4O14493 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 KRT17P6-201ENST00000453795 1220 ntBASIC16.81■□□□□ 0.28
CLDN4O14493 MINOS1P3-201ENST00000457048 203 ntBASIC16.81■□□□□ 0.28
CLDN4O14493 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN4O14493 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN4O14493 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN4O14493 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.81■□□□□ 0.28
CLDN4O14493 MIR3652-201ENST00000579335 131 ntBASIC16.81■□□□□ 0.28
CLDN4O14493 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms